PRG4 34716

Name: PRG4	Sequence: fasta or formatted (1404aa)		NCBI GI: 67190163
Description: proteoglycan 4 isoform A		Referenced in: Bone and Related Tissues Ovary, Uterus and Placenta
Other entries for this name: alt prot [1363aa] proteoglycan 4 isoform B alt prot [1311aa] proteoglycan 4 isoform C alt prot [1270aa] proteoglycan 4 isoform D
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 108 3 C cysteine 1.6 22 2 D aspartate 2.6 37 1 E glutamate 7.4 104 2 F phenylalanine 1.6 22 3 G glycine 2.8 40 2 H histidine 0.7 10 1 I isoleucine 2.6 37 3 K lysine 11.8 165 3 L leucine 3.4 48 5 M methionine 1.0 14 1 N asparagine 2.6 37 1 P proline 17.3 243 3 Q glutamine 2.1 29 2 R arginine 3.0 42 4 S serine 6.4 90 12 T threonine 20.2 284 4 V valine 2.9 41 2 W tryptophan 0.5 7 1 Y tyrosine 1.7 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteoglycan 4 isoform A PRG4 0.960 proteoglycan 4 isoform B PRG4 0.857 proteoglycan 4 isoform D PRG4 0.857 proteoglycan 4 isoform C MUC2 0.129 mucin 2 precursor NACA 0.098 nascent polypeptide-associated complex alpha subuni... DPCR1 0.078 diffuse panbronchiolitis critical region 1 protein ... LOC100294420 0.071 PREDICTED: similar to mucin 2 LOC100294236 0.071 PREDICTED: similar to diffuse panbronchiolitis crit... MUC17 0.062 mucin 17 MDC1 0.062 mediator of DNA-damage checkpoint 1 MUC6 0.059 mucin 6, gastric ZAN 0.059 zonadhesin isoform 3 ZAN 0.059 zonadhesin isoform 6 TTN 0.058 titin isoform N2-A MUC4 0.055 mucin 4 isoform a PCLO 0.054 piccolo isoform 2 PCLO 0.054 piccolo isoform 1 LOC284297 0.053 hypothetical protein LOC284297 MUC5AC 0.051 mucin 5AC KIAA0754 0.051 hypothetical protein LOC643314 MUC5B 0.051 mucin 5, subtype B, tracheobronchial MUC3A 0.050 PREDICTED: mucin 3A, intestinal FLJ22184 0.050 PREDICTED: hypothetical protein FLJ22184 MUC12 0.048 PREDICTED: mucin 12 RAPH1 0.048 Ras association and pleckstrin homology domains 1 is... POLR2A 0.048 DNA-directed RNA polymerase II A LOC100131514 0.047 PREDICTED: similar to hCG1747327, partial MUC12 0.046 PREDICTED: mucin 12, cell surface associated MUC12 0.046 PREDICTED: mucin 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.