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Search of human proteins with 31791024
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31791024 keratin associated protein 19-6 [Homo sapiens]
(58 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31791024 keratin associated protein 19-6 [Homo sapiens] 143 3e-35
gi|31791018 keratin associated protein 19-7 [Homo sapiens] 102 5e-23
gi|31791028 keratin associated protein 19-4 [Homo sapiens] 100 3e-22
gi|31791026 keratin associated protein 19-3 [Homo sapiens] 100 3e-22
gi|31791030 keratin associated protein 19-1 [Homo sapiens] 97 2e-21
gi|31791022 keratin associated protein 19-5 [Homo sapiens] 96 8e-21
gi|149944573 keratin associated protein 19-8 [Homo sapiens] 88 2e-18
gi|31791014 keratin associated protein 20-2 [Homo sapiens] 80 4e-16
gi|31791032 keratin associated protein 19-2 [Homo sapiens] 66 7e-12
gi|31791038 keratin associated protein 6-1 [Homo sapiens] 56 7e-09
gi|31791020 keratin associated protein 20-1 [Homo sapiens] 54 2e-08
gi|31791016 keratin associated protein 21-2 [Homo sapiens] 52 1e-07
gi|31791040 keratin associated protein 6-2 [Homo sapiens] 52 1e-07
gi|153945796 keratin associated protein 6-3 [Homo sapiens] 51 2e-07
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 49 9e-07
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 49 9e-07
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 49 9e-07
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-06
gi|31791010 keratin associated protein 21-1 [Homo sapiens] 46 7e-06
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 45 2e-05
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 42 8e-05
gi|189303554 keratin associated protein 20-3 [Homo sapiens] 42 1e-04
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 41 2e-04
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 40 3e-04
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 40 5e-04
gi|119395750 keratin 1 [Homo sapiens] 39 7e-04
gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 39 7e-04
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 39 0.001
gi|31791012 keratin associated protein 22-1 [Homo sapiens] 39 0.001
gi|4505487 occludin [Homo sapiens] 38 0.002
>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
Length = 58
Score = 143 bits (360), Expect = 3e-35
Identities = 58/58 (100%), Positives = 58/58 (100%)
Query: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
MRYYGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGFY
Sbjct: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
>gi|31791018 keratin associated protein 19-7 [Homo sapiens]
Length = 63
Score = 102 bits (255), Expect = 5e-23
Identities = 46/63 (73%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 1 MRYYGSYYRGLGYGCGGFGGLGYG--CGCGGYR---YGSGYGGYRYGCCRPSCREGYGFS 55
M Y GSYY GLGYGCGGFGGLGYG CGCG +R YG GYGGYRY CC PSC GY S
Sbjct: 1 MSYSGSYYGGLGYGCGGFGGLGYGYSCGCGSFRRLGYGCGYGGYRYSCCHPSCYGGYWSS 60
Query: 56 GFY 58
GFY
Sbjct: 61 GFY 63
>gi|31791028 keratin associated protein 19-4 [Homo sapiens]
Length = 84
Score = 100 bits (248), Expect = 3e-22
Identities = 45/60 (75%), Positives = 47/60 (78%), Gaps = 5/60 (8%)
Query: 1 MRYYGSYYRGLGYGCGGFGGL--GYGCGCGGYR---YGSGYGGYRYGCCRPSCREGYGFS 55
M YYGSYYRGLGYGCGGFGGL GYGCGCG +R YG G+GG YG CRPSC GYGFS
Sbjct: 1 MSYYGSYYRGLGYGCGGFGGLGYGYGCGCGSFRRLGYGCGFGGNGYGYCRPSCYGGYGFS 60
>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
Length = 81
Score = 100 bits (248), Expect = 3e-22
Identities = 48/81 (59%), Positives = 49/81 (60%), Gaps = 23/81 (28%)
Query: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCG-----------------------GYRYGSGYG 37
M YYGSYY GLGYGCGGFGGLGYG GCG GY YGSG+G
Sbjct: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
Query: 38 GYRYGCCRPSCREGYGFSGFY 58
GY YGC RPS GYGFSGFY
Sbjct: 61 GYGYGCYRPSYYGGYGFSGFY 81
>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
Length = 90
Score = 97.4 bits (241), Expect = 2e-21
Identities = 47/90 (52%), Positives = 49/90 (54%), Gaps = 32/90 (35%)
Query: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCG-------------------------------- 28
M +YGSYY GLGY CGGFGGLGYG GCG
Sbjct: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
Query: 29 GYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
GY YGSG+GGY YGCCRPS GYGFSGFY
Sbjct: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
>gi|31791022 keratin associated protein 19-5 [Homo sapiens]
Length = 72
Score = 95.5 bits (236), Expect = 8e-21
Identities = 45/72 (62%), Positives = 47/72 (65%), Gaps = 14/72 (19%)
Query: 1 MRYYGSYYRGLGYGCGGFG--GLGYGCGCG------------GYRYGSGYGGYRYGCCRP 46
M YYG+YY GLGYG GGF G GYGCGCG GY YGSG+GGY Y CRP
Sbjct: 1 MNYYGNYYGGLGYGYGGFDDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGFGGYGYRSCRP 60
Query: 47 SCREGYGFSGFY 58
SC GYGFSGFY
Sbjct: 61 SCYGGYGFSGFY 72
>gi|149944573 keratin associated protein 19-8 [Homo sapiens]
Length = 63
Score = 87.8 bits (216), Expect = 2e-18
Identities = 41/63 (65%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 1 MRYYGSYYRGLGYGCGGFG--GLGYGCGCGGYR---YGSGYGGYRYGCCRPSCREGYGFS 55
M YY SYY GLGYG GGFG G GYGCG G +R YG GYGGY + CCRP GYGFS
Sbjct: 1 MSYYRSYYGGLGYGYGGFGGWGYGYGCGYGSFRRLGYGCGYGGYGFSCCRPLYYGGYGFS 60
Query: 56 GFY 58
FY
Sbjct: 61 AFY 63
>gi|31791014 keratin associated protein 20-2 [Homo sapiens]
Length = 65
Score = 80.1 bits (196), Expect = 4e-16
Identities = 39/66 (59%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Query: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCG--------GYRYGSGYGGYRYGCCRPSCREGY 52
M YY +YY GL YG G GG GYGCGCG G YG GYGGY YGCCRPSC Y
Sbjct: 1 MCYYSNYYGGLRYGYGVLGG-GYGCGCGYGHGYGGLGCGYGRGYGGYGYGCCRPSCYGRY 59
Query: 53 GFSGFY 58
GFY
Sbjct: 60 WSCGFY 65
>gi|31791032 keratin associated protein 19-2 [Homo sapiens]
Length = 52
Score = 65.9 bits (159), Expect = 7e-12
Identities = 29/49 (59%), Positives = 31/49 (63%)
Query: 10 GLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
G G GCG F LGYGCG G RYG G+ G GCC PSC Y F+GFY
Sbjct: 4 GYGCGCGSFCRLGYGCGYEGCRYGCGHRGCGDGCCCPSCYRRYRFTGFY 52
>gi|31791038 keratin associated protein 6-1 [Homo sapiens]
Length = 71
Score = 55.8 bits (133), Expect = 7e-09
Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 18/70 (25%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYG-----------CGCGGYRYGSGYGGYRYGCCRPSCREG 51
YYG+YY GYG G+GGLGYG CGCG R G GYG YG R C G
Sbjct: 5 YYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYG---YG-SRSLCGYG 60
Query: 52 YGF---SGFY 58
YG SG+Y
Sbjct: 61 YGCGSGSGYY 70
>gi|31791020 keratin associated protein 20-1 [Homo sapiens]
Length = 56
Score = 54.3 bits (129), Expect = 2e-08
Identities = 31/61 (50%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 1 MRYYGSYYRGLGYGCGGFGGLGYGCGCGGYRYG---SGYGGYRYGCCRPSCREGYGFSGF 57
M YY +YY G GYG GLG G GCG YG GYGGY G PSC Y GF
Sbjct: 1 MIYYSNYYGGYGYG-----GLGCGYGCGYRGYGCGYGGYGGYGNGYYCPSCYGRYWSYGF 55
Query: 58 Y 58
Y
Sbjct: 56 Y 56
>gi|31791016 keratin associated protein 21-2 [Homo sapiens]
Length = 83
Score = 52.0 bits (123), Expect = 1e-07
Identities = 31/60 (51%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCGCG-----GYRYGSGYG-GYRYGCCRPS-CREGYGFS 55
YY + G GYG G G GYGCG G G RYGSGYG G YGC S C G G+S
Sbjct: 5 YYRNCCGGCGYGSGWSSGCGYGCGYGCGYGSGCRYGSGYGTGCGYGCGYGSGCGYGCGYS 64
Score = 42.7 bits (99), Expect = 6e-05
Identities = 24/50 (48%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 2 RYYGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYR---YGCCRPSC 48
RY Y G GYGCG G GYGCG Y S GYR Y C SC
Sbjct: 38 RYGSGYGTGCGYGCGYGSGCGYGCG-----YSSSCCGYRPLCYRRCYSSC 82
>gi|31791040 keratin associated protein 6-2 [Homo sapiens]
Length = 62
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCG---------CGGYRYGSGYGGYRYGCCRPSCREGY 52
YYG+YY GYGC G+ GLGYG G CG YG GYG + C C GY
Sbjct: 5 YYGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCCG---YGHGYGSRFFCGCGYGCGSGY 60
Score = 29.6 bits (65), Expect = 0.55
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Query: 27 CGGYRYGSGYGGYRYGCCRPSCREGYGF 54
CG Y YG+ YG + YGCC EG G+
Sbjct: 2 CGSY-YGNYYGDHGYGCCG---YEGLGY 25
>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
Length = 110
Score = 50.8 bits (120), Expect = 2e-07
Identities = 29/55 (52%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCGCGGYRYG-SGYGGYRYGCCRPSCREGYGFSG 56
YY +Y G GYGC G+GGL GCG GG YG GYGG +G C GYG G
Sbjct: 12 YYRNYNGGHGYGCCGYGGL--GCGYGGCGYGCCGYGGLGFGYGGLDC--GYGGLG 62
Score = 50.1 bits (118), Expect = 4e-07
Identities = 34/79 (43%), Positives = 37/79 (46%), Gaps = 25/79 (31%)
Query: 5 GSYYRGLGYGCGGFGGLGYGCG---CGGYRYGSGYG-----GYR-----YGC-------- 43
G Y G GYGC G+GGLG+G G CG G GYG GYR YGC
Sbjct: 31 GCGYGGCGYGCCGYGGLGFGYGGLDCGYGGLGCGYGSFCGCGYRGLDCGYGCGYGYVSHS 90
Query: 44 ---CRPSCREGYGFS-GFY 58
C C GYG S G+Y
Sbjct: 91 FCGCGYRCGSGYGSSFGYY 109
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
Query: 27 CGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
CG Y Y + GG+ YGCC GYG G
Sbjct: 9 CGSY-YRNYNGGHGYGCC------GYGGLG 31
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 48.9 bits (115), Expect = 9e-07
Identities = 28/48 (58%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGC---CRPSC 48
YG+ Y G GYGCG G GYGCGCG GSGY GYR C C SC
Sbjct: 52 YGTGY-GCGYGCGY--GTGYGCGCGS---GSGYCGYRPFCFRRCYSSC 93
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/64 (45%), Positives = 32/64 (50%), Gaps = 20/64 (31%)
Query: 4 YGSYYRGLGYGCG---GFG-------GLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYG 53
YGS Y G GYG G G+G G GYGCG YG GY G YGC C G G
Sbjct: 28 YGSSY-GCGYGTGYSCGYGSGSGCGYGTGYGCG-----YGCGY-GTGYGC---GCGSGSG 77
Query: 54 FSGF 57
+ G+
Sbjct: 78 YCGY 81
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/59 (45%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCGCG-GYRYGSGYG-GYRYGCCRPS-CREGYGFSGFY 58
YYG+ GYGC G G G GCG G YG GYG GY G S C G G+ Y
Sbjct: 5 YYGN---SCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGY 60
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 48.9 bits (115), Expect = 9e-07
Identities = 28/48 (58%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGC---CRPSC 48
YG+ Y G GYGCG G GYGCGCG GSGY GYR C C SC
Sbjct: 52 YGTGY-GCGYGCGY--GTGYGCGCGS---GSGYCGYRPFCFRRCYSSC 93
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/64 (45%), Positives = 32/64 (50%), Gaps = 20/64 (31%)
Query: 4 YGSYYRGLGYGCG---GFG-------GLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYG 53
YGS Y G GYG G G+G G GYGCG YG GY G YGC C G G
Sbjct: 28 YGSSY-GCGYGTGYSCGYGSGSGCGYGTGYGCG-----YGCGY-GTGYGC---GCGSGSG 77
Query: 54 FSGF 57
+ G+
Sbjct: 78 YCGY 81
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/59 (45%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCGCG-GYRYGSGYG-GYRYGCCRPS-CREGYGFSGFY 58
YYG+ GYGC G G G GCG G YG GYG GY G S C G G+ Y
Sbjct: 5 YYGN---SCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGY 60
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 48.9 bits (115), Expect = 9e-07
Identities = 28/48 (58%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGC---CRPSC 48
YG+ Y G GYGCG G GYGCGCG GSGY GYR C C SC
Sbjct: 82 YGTGY-GCGYGCGY--GTGYGCGCGS---GSGYCGYRPFCFRRCYSSC 123
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/64 (45%), Positives = 32/64 (50%), Gaps = 20/64 (31%)
Query: 4 YGSYYRGLGYGCG---GFG-------GLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYG 53
YGS Y G GYG G G+G G GYGCG YG GY G YGC C G G
Sbjct: 58 YGSSY-GCGYGTGYSCGYGSGSGCGYGTGYGCG-----YGCGY-GTGYGC---GCGSGSG 107
Query: 54 FSGF 57
+ G+
Sbjct: 108 YCGY 111
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/59 (45%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCGCG-GYRYGSGYG-GYRYGCCRPS-CREGYGFSGFY 58
YYG+ GYGC G G G GCG G YG GYG GY G S C G G+ Y
Sbjct: 35 YYGN---SCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGY 90
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 47.4 bits (111), Expect = 3e-06
Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGC---CRPSC 48
YG+ + G GYGCG G GYGCGCG GSGY GYR C C SC
Sbjct: 88 YGTGF-GCGYGCGY--GTGYGCGCGS---GSGYCGYRPFCFRRCYSSC 129
Score = 44.3 bits (103), Expect = 2e-05
Identities = 33/69 (47%), Positives = 34/69 (49%), Gaps = 14/69 (20%)
Query: 4 YGSYY-----RGLGYGCGGFGGLGYGCG--CG-GYRYGSGYG---GYRYGC---CRPSCR 49
YGS Y G GYG G G GYG G CG G YGSGYG G YGC SC
Sbjct: 12 YGSSYGCGYGSGYGYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYSCG 71
Query: 50 EGYGFSGFY 58
G G+S Y
Sbjct: 72 YGSGYSCGY 80
Score = 43.1 bits (100), Expect = 5e-05
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 16/66 (24%)
Query: 4 YGSYYRGLGYGCG---GFG-----GLGYGCGCG-GYRYGSGYG---GYRYGCCRPSCREG 51
YGS Y G GYG G G+G G G G GCG G +G GYG G YGC C G
Sbjct: 56 YGSSY-GCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGYGC---GCGSG 111
Query: 52 YGFSGF 57
G+ G+
Sbjct: 112 SGYCGY 117
>gi|31791010 keratin associated protein 21-1 [Homo sapiens]
Length = 79
Score = 45.8 bits (107), Expect = 7e-06
Identities = 30/52 (57%), Positives = 31/52 (59%), Gaps = 9/52 (17%)
Query: 4 YGSYYRGLGYGCGGFG---GLGYGCGCG-GYRYGSGYGGYRYGC---CRPSC 48
YG+ Y G GYGCG FG G GYG G G GY GSGY GYR C C SC
Sbjct: 30 YGTGY-GCGYGCG-FGSHYGCGYGTGYGCGYGSGSGYCGYRPFCFRRCYSSC 79
Score = 44.7 bits (104), Expect = 2e-05
Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 12/55 (21%)
Query: 3 YYGSYYRGLGYGCGGFGGLGYGCGCG-GYRYGSGYG---GYRYGCCRPSCREGYG 53
YYG+ G G GCG G G GCGCG G YG GYG G YGC GYG
Sbjct: 5 YYGNSC-GYGSGCGCGYGSGSGCGCGYGTGYGCGYGCGFGSHYGC-------GYG 51
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/39 (53%), Positives = 21/39 (53%)
Query: 10 GLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSC 48
G G GCGG G GCG G YGSG GG CC P C
Sbjct: 9 GCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCCVPVC 47
Score = 37.7 bits (86), Expect = 0.002
Identities = 22/41 (53%), Positives = 22/41 (53%), Gaps = 9/41 (21%)
Query: 15 CGGFGGLGYGCG-----CGGYRYGSGYGGYRYGC--CRPSC 48
CG GG G GCG CGG GSG GGY GC C SC
Sbjct: 4 CGCSGGCGSGCGGCGSGCGGC--GSGCGGYGSGCGGCGSSC 42
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 12/47 (25%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYG----------CCRPSC 48
GCG GG GCG CGG + G G GG + G CC+P C
Sbjct: 103 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCC 149
Score = 32.3 bits (72), Expect = 0.085
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYGC 43
GCG GG GCG CGG + G G GG + GC
Sbjct: 83 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 114
Score = 30.0 bits (66), Expect = 0.42
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGC 43
GC G G G G GCGG GSG GG GC
Sbjct: 2 GCCGCSG-GCGSGCGGC--GSGCGGCGSGC 28
Score = 30.0 bits (66), Expect = 0.42
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 15 CGGFGGLGYGCG-CGGYRYGSG-YGGYRYGC 43
CG GG GCG CGG + G G GG + GC
Sbjct: 74 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC 104
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 42.4 bits (98), Expect = 8e-05
Identities = 22/44 (50%), Positives = 22/44 (50%)
Query: 5 GSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSC 48
GS G G GCGG G GCG G GSG GG CC P C
Sbjct: 11 GSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPIC 54
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 12/47 (25%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYG----------CCRPSC 48
GCG GG GCG CGG + G G GG + G CC+P C
Sbjct: 160 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCC 206
Score = 33.5 bits (75), Expect = 0.038
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 15 CGGFGGLGYGCG-----CGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
CG GG G GCG CGG GSG GG GC C G G G
Sbjct: 4 CGCSGGCGSGCGGCGSGCGGC--GSGCGGCGSGC--GGCGSGCGGCG 46
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYGCCRPSCREGYGFSG 56
GCG GG GCG CGG + G G GG + GC SC G G
Sbjct: 100 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCV--SCGGSKGGCG 142
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
GC G G G G GCGG GSG GG GC C G G G
Sbjct: 2 GCCGCSG-GCGSGCGGC--GSGCGGCGSGC--GGCGSGCGGCG 39
>gi|189303554 keratin associated protein 20-3 [Homo sapiens]
Length = 44
Score = 41.6 bits (96), Expect = 1e-04
Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 12/41 (29%)
Query: 1 MRYYGSYYRGLGYG-------CGGFGGL-----GYGCGCGG 29
M YYG+YY GLGYG GFG GY CGCGG
Sbjct: 1 MSYYGNYYGGLGYGYDCKYSYTSGFGAFRILDCGYRCGCGG 41
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 41.2 bits (95), Expect = 2e-04
Identities = 22/42 (52%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 9 RGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGC--CRPSC 48
RG G GCGG G GCG G GSG GG GC C SC
Sbjct: 8 RGCGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSC 49
Score = 36.6 bits (83), Expect = 0.004
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYGCCRPSC 48
GCG GG GCG CGG + G G G + CC+P C
Sbjct: 87 GCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCC 123
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 5 GSYYRGLGYGCGGFGGLGYGC--GCGGYRYGSGYGGYR----YGCCRPSC 48
GS G G GCGG G GC GCGG G G R CC+P C
Sbjct: 18 GSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVCCCKPVC 67
Score = 26.2 bits (56), Expect = 6.1
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
GC G G G GCGG GS GG GC C G G G
Sbjct: 2 GCCGCSR-GCGSGCGGC--GSSCGGCGSGC--GGCGSGRGGCG 39
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 40.4 bits (93), Expect = 3e-04
Identities = 26/57 (45%), Positives = 27/57 (47%), Gaps = 13/57 (22%)
Query: 5 GSYYRGLGYGCG----GFGGLGYGC--------GCGGYRYG-SGYGGYRYGCCRPSC 48
GS G G GCG G GG G GC GCGG G +G GG GCC P C
Sbjct: 11 GSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVC 67
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYGCCRPSC 48
GCG GG GCG CGG + G G YG + CC+P C
Sbjct: 128 GCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCC 164
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
GC G G G G GCGG GSG GG GC C G G G
Sbjct: 2 GCCGCSG-GCGSGCGGR--GSGCGGCGSGC--GGCGSGCGGCG 39
Score = 26.6 bits (57), Expect = 4.6
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 12/42 (28%)
Query: 14 GCGGFGGLGYGC-----------GCGGYRYGSG-YGGYRYGC 43
GCG GG GC CGG + G G GG + GC
Sbjct: 88 GCGSCGGSKRGCVSCGVSKGACGSCGGSKGGCGSCGGSKGGC 129
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 39.7 bits (91), Expect = 5e-04
Identities = 22/41 (53%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 14 GCGGF-GGLGYGCG-----CGGYRYGSGYGGYRYGCCRPSC 48
GC G GG G CG CGG GSGYGG GCC P C
Sbjct: 2 GCSGCSGGCGSSCGGCGSSCGGC--GSGYGGCGSGCCVPVC 40
Score = 30.8 bits (68), Expect = 0.25
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 15 CGGFGGLGYGCG-CGGYRYGSGYGGYRYGCCRPSC 48
CG GG GCG CGG + G G CC P C
Sbjct: 67 CGSCGGCKGGCGSCGGSKGGCGSS-----CCVPVC 96
Score = 29.3 bits (64), Expect = 0.72
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 15 CGGFGGLGYGCG-CGGYRYGSGYGGYRYGCCRPSC 48
CG GG CG CGG + G G G G C SC
Sbjct: 57 CGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSC 91
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 11/47 (23%)
Query: 15 CGGFGGLGYGCG------CGGYR-----YGSGYGGYRYGCCRPSCRE 50
CG GG GCG C Y+ G G + CC+PSC +
Sbjct: 111 CGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPSCSQ 157
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 16/53 (30%)
Query: 14 GCGGFGGLGYGCG---------------CGGYRYGSGY-GGYRYGCCRPSCRE 50
GCG GG GCG CGG + G+ GG + GC C +
Sbjct: 76 GCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSKGVCGFRGGSKGGCGSCGCSQ 128
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 39.3 bits (90), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGF 57
+G Y G G+G GGFGG G+G GG G G+GG+ G G+G GF
Sbjct: 90 FGGGYGGGGFGGGGFGGGGFG---GGGIGGGGFGGFGSG------GGGFGGGGF 134
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/34 (58%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 5 GSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGG 38
GSY G G G GG G G G GGYR GSG GG
Sbjct: 564 GSY--GSGGGGGGHGSYGSGSSSGGYRGGSGGGG 595
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/39 (48%), Positives = 20/39 (51%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYG 42
YGS G G G +G G G G G Y GS GGYR G
Sbjct: 552 YGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGG 590
Score = 34.7 bits (78), Expect = 0.017
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 5 GSYYRGLGYGCGGFGGLGYGCGC--GGYRYGSGYGGYRYGCCRP 46
G + G G G GGFGG G G G GG G GYGG C P
Sbjct: 106 GGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPP 149
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/43 (46%), Positives = 20/43 (46%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
G G GG G G G GG YGSG G Y G R YG G
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGG 556
Score = 33.9 bits (76), Expect = 0.029
Identities = 24/54 (44%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 5 GSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYR--YGCCRPSCREGYGFSG 56
G RG G G G GG YG G G Y G G GG R YG S G G G
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYG 567
Score = 33.5 bits (75), Expect = 0.038
Identities = 25/59 (42%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 5 GSYYRGLGYGCG----GFGGLGYGCGCGGYRYGSGYGG---YRYGCCRPSCREGYGFSG 56
GSY G G G G G GG YG G G Y G G GG Y G R G G G
Sbjct: 537 GSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGG 595
Score = 32.7 bits (73), Expect = 0.065
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Query: 3 YYGSYYRGLGYGCGGFG--------GLGYGCGCGGYRYGSGYGGYRYG 42
Y G + G G+G GGFG G+G G GG+ G G+GG YG
Sbjct: 94 YGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFG-GGGFGGGGYG 140
Score = 32.3 bits (72), Expect = 0.085
Identities = 24/53 (45%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
YGS G YG GG G G G G GG R G GG YG S G G G
Sbjct: 525 YGS--GGSSYGSGG-GSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGG 574
Score = 32.3 bits (72), Expect = 0.085
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 4 YGSYYRGLGYGCGGFGGLG-YGCG-----CGGYRYGSGYGGYRYG 42
YGS G G GG GG G YG G GG YGSG GG +G
Sbjct: 532 YGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHG 576
>gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapiens]
Length = 1270
Score = 39.3 bits (90), Expect = 7e-04
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 4 YGSYYRGLGYGCGGFGG------LGYGCGCGGYRYGSGYGGYR 40
YG Y GYG GG+GG GYG G GG G GG+R
Sbjct: 1185 YGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFR 1227
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 5 GSYYRGLGYG----CGGFGGLGYGCGCGGYR--YGSGYGGYRYGCCRPSCREGYG 53
GS Y G GYG GG+G GYG +R YG+G GG G R R G
Sbjct: 1177 GSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 1231
Score = 35.4 bits (80), Expect = 0.010
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 7 YYRGLGYGCGG--FGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYG 53
Y G GY GG + G GYG GGY G GYG YG S R GYG
Sbjct: 1167 YDNGSGYRRGGSSYSGGGYG---GGYSSG-GYGSGGYGGSANSFRAGYG 1211
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 5 GSYYRGLGYGCGGFGGLGYGCGCGGY---RYGSGYGGYRY 41
G YRG G G GG G G G Y +G G GG Y
Sbjct: 1231 GGDYRGPSGGYRGSGGFQRGGGRGAYGTGYFGQGRGGGGY 1270
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 38.9 bits (89), Expect = 0.001
Identities = 19/39 (48%), Positives = 19/39 (48%)
Query: 10 GLGYGCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSC 48
G G CGG G GCG G GSG GG CC P C
Sbjct: 9 GCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVC 47
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 14 GCGGFGGLGYGCG-CGGYR--YGSGYGGYRYGCCRPSC 48
GCG GG GCG CGG + GSG GG CC P C
Sbjct: 98 GCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVC 135
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 14 GCGGFGGLGYGCG-CGGYR--YGSGYGGYRYGCCRPSC 48
GCG GG GCG CGG + GSG GG GC P C
Sbjct: 176 GCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVC 213
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYGC-----CRPSCREGYGFSG 56
GCG GG GCG CGG + G G GG + GC + C G G G
Sbjct: 78 GCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCG 127
Score = 33.5 bits (75), Expect = 0.038
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 14/49 (28%)
Query: 14 GCG-GFGGLGYGCG-------------CGGYRYGSGYGGYRYGCCRPSC 48
GCG G GG G GCG C G + G G + CC+P C
Sbjct: 196 GCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCC 244
Score = 32.3 bits (72), Expect = 0.085
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 14 GCGGFGGLGYGCG-CGGYRYGSG-YGGYRYGC 43
GCG GG GCG CGG + G G GG + GC
Sbjct: 68 GCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGC 99
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
GC G G G G CGG GSG GG GC C G G SG
Sbjct: 2 GCCGCSG-GCGSSCGGC--GSGCGGCGSGC--GGCGSGCGGSG 39
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 15 CGGFGGLGYGCG-CGGYRYGSGYGGYRYGCCRPSC 48
CG GG GCG CGG + G G G G C C
Sbjct: 167 CGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGC 201
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/43 (41%), Positives = 18/43 (41%)
Query: 14 GCGGFGGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSG 56
GCG GG GCG G GSG G C SC G G
Sbjct: 186 GCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKG 228
>gi|31791012 keratin associated protein 22-1 [Homo sapiens]
Length = 48
Score = 38.5 bits (88), Expect = 0.001
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 19 GGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
GG GY G G YG G GY Y C P C E FSG +
Sbjct: 9 GGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
>gi|4505487 occludin [Homo sapiens]
Length = 522
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 2 RYYGSYYRG--LGYGCGGFGGLGYGCGCG-GYRYGSGYGGY 39
R YG+ G +GY GG G YG G G GY YG GYGGY
Sbjct: 91 RGYGTSLLGGSVGYPYGGSGFGSYGSGYGYGYGYGYGYGGY 131
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.161 0.607
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,125,873
Number of Sequences: 37866
Number of extensions: 151205
Number of successful extensions: 2390
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 813
Number of HSP's gapped (non-prelim): 896
length of query: 58
length of database: 18,247,518
effective HSP length: 31
effective length of query: 27
effective length of database: 17,073,672
effective search space: 460989144
effective search space used: 460989144
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.