OCLN 29066

Name: OCLN	Sequence: fasta or formatted (522aa)		NCBI GI: 4505487
Description: occludin		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 33 3 C cysteine 1.3 7 1 D aspartate 5.9 31 2 E glutamate 6.3 33 2 F phenylalanine 3.6 19 2 G glycine 7.5 39 2 H histidine 1.5 8 1 I isoleucine 5.9 31 2 K lysine 5.6 29 2 L leucine 6.1 32 2 M methionine 2.9 15 1 N asparagine 2.7 14 1 P proline 6.3 33 3 Q glutamine 3.6 19 2 R arginine 5.4 28 2 S serine 9.2 48 2 T threonine 4.2 22 2 V valine 6.1 32 2 W tryptophan 1.0 5 1 Y tyrosine 8.4 44 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 occludin ELL 0.056 elongation factor RNA polymerase II ELL2 0.043 elongation factor, RNA polymerase II, 2 MARVELD2 0.043 MARVEL domain containing 2 isoform 1 MARVELD2 0.031 MARVEL domain containing 2 isoform beta ELL3 0.031 elongation factor RNA polymerase II-like 3 OCEL1 0.022 occludin/ELL domain containing 1 KRTAP19-3 0.020 keratin associated protein 19-3 KRTAP19-1 0.019 keratin associated protein 19-1 KRTAP19-8 0.019 keratin associated protein 19-8 KRTAP20-1 0.018 keratin associated protein 20-1 HNRNPD 0.017 heterogeneous nuclear ribonucleoprotein D isoform a ... HNRNPD 0.017 heterogeneous nuclear ribonucleoprotein D isoform b ... HNRNPA2B1 0.017 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPA2B1 0.017 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... LOC731932 0.016 PREDICTED: hypothetical protein LOC731932 0.016 PREDICTED: hypothetical protein LOC731932 0.016 PREDICTED: hypothetical protein HNRNPA1 0.016 heterogeneous nuclear ribonucleoprotein A1 isoform b... LOC647262 0.016 PREDICTED: hypothetical protein KRTAP21-2 0.016 keratin associated protein 21-2 KRTAP21-1 0.016 keratin associated protein 21-1 KRT76 0.016 keratin 76 KRT9 0.015 keratin 9 KRTAP19-5 0.014 keratin associated protein 19-5 KRT6C 0.013 keratin 6C KRT6A 0.013 keratin 6A KRT6B 0.013 keratin 6B KRT1 0.013 keratin 1 KRT10 0.013 keratin 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.