Guide to the Human Genome
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Name: KRTAP20-2 Sequence: fasta or formatted (65aa) NCBI GI: 31791014
Description:

keratin associated protein 20-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           12.3          8           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       1.5          1           1
 G glycine            36.9         24           3
 H histidine           1.5          1           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             4.6          3           1
 M methionine          1.5          1           1
 N asparagine          1.5          1           1
 P proline             1.5          1           1
 Q glutamine           0.0          0           0
 R arginine            6.2          4           1
 S serine              4.6          3           1
 T threonine           0.0          0           0
 V valine              1.5          1           1
 W tryptophan          1.5          1           1
 Y tyrosine           24.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 20-2 
KRTAP19-5             0.518   keratin associated protein 19-5 
KRTAP20-1             0.504   keratin associated protein 20-1 
KRTAP19-3             0.468   keratin associated protein 19-3 
KRTAP19-1             0.433   keratin associated protein 19-1 
KRTAP19-7             0.433   keratin associated protein 19-7 
KRTAP19-8             0.418   keratin associated protein 19-8 
KRTAP19-6             0.390   keratin associated protein 19-6 
KRTAP19-4             0.348   keratin associated protein 19-4 
LOC647262             0.277   PREDICTED: hypothetical protein 
KRTAP19-2             0.270   keratin associated protein 19-2 
KRTAP6-1              0.262   keratin associated protein 6-1 
LOC731932             0.255   PREDICTED: hypothetical protein 
LOC731932             0.255   PREDICTED: hypothetical protein 
LOC731932             0.255   PREDICTED: hypothetical protein 
KRTAP21-1             0.255   keratin associated protein 21-1 
KRTAP6-2              0.248   keratin associated protein 6-2 
KRTAP21-2             0.248   keratin associated protein 21-2 
KRTAP6-3              0.248   keratin associated protein 6-3 
KRTAP22-1             0.191   keratin associated protein 22-1 
LOC100292523          0.149   PREDICTED: similar to Keratin-associated protein 22...
LOC100291010          0.149   PREDICTED: hypothetical protein XP_002348098 
LOC100288287          0.149   PREDICTED: hypothetical protein XP_002343781 
KRT6C                 0.142   keratin 6C 
KRT6A                 0.142   keratin 6A 
KRT6B                 0.142   keratin 6B 
KRTAP5-4              0.135   keratin associated protein 5-4 
KRT5                  0.135   keratin 5 
KRT9                  0.128   keratin 9 
KRTAP20-3             0.128   keratin associated protein 20-3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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