Guide to the Human Genome
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Name: KRTAP21-1 Sequence: fasta or formatted (79aa) NCBI GI: 31791010
Description:

keratin associated protein 21-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           19.0         15           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       3.8          3           1
 G glycine            35.4         28           1
 H histidine           1.3          1           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine          1.3          1           1
 N asparagine          2.5          2           1
 P proline             1.3          1           1
 Q glutamine           0.0          0           0
 R arginine            3.8          3           2
 S serine             11.4          9           2
 T threonine           2.5          2           1
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           17.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 21-1 
LOC731932             0.778   PREDICTED: hypothetical protein 
LOC731932             0.778   PREDICTED: hypothetical protein 
LOC731932             0.750   PREDICTED: hypothetical protein 
LOC647262             0.710   PREDICTED: hypothetical protein 
KRTAP21-2             0.580   keratin associated protein 21-2 
KRTAP19-1             0.284   keratin associated protein 19-1 
KRTAP6-3              0.256   keratin associated protein 6-3 
KRTAP6-1              0.250   keratin associated protein 6-1 
KRTAP19-3             0.244   keratin associated protein 19-3 
KRTAP6-2              0.216   keratin associated protein 6-2 
KRTAP19-5             0.210   keratin associated protein 19-5 
KRTAP20-2             0.205   keratin associated protein 20-2 
KRT16                 0.199   keratin 16 
KRTAP5-5              0.193   keratin associated protein 5-5 
KRTAP5-4              0.193   keratin associated protein 5-4 
KRT13                 0.182   keratin 13 isoform b 
KRT13                 0.182   keratin 13 isoform a 
KRTAP5-2              0.182   keratin associated protein 5-2 
KRT9                  0.170   keratin 9 
KRTAP19-4             0.170   keratin associated protein 19-4 
KRTAP20-1             0.165   keratin associated protein 20-1 
KRT84                 0.159   keratin, hair, basic, 4 
LOR                   0.159   loricrin 
KRTAP5-10             0.159   keratin associated protein 5-10 
KRT1                  0.153   keratin 1 
KRT5                  0.148   keratin 5 
KRTAP5-1              0.148   keratin associated protein 5-1 
KRT2                  0.142   keratin 2 
KRT3                  0.142   keratin 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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