Guide to the Human Genome
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Name: KRTAP5-2 Sequence: fasta or formatted (177aa) NCBI GI: 51972220
Description:

keratin associated protein 5-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.6          1           1
 C cysteine           32.8         58           3
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine            24.9         44           2
 H histidine           0.0          0           0
 I isoleucine          0.6          1           1
 K lysine              4.5          8           1
 L leucine             0.0          0           0
 M methionine          0.6          1           1
 N asparagine          0.6          1           1
 P proline             4.5          8           1
 Q glutamine           3.4          6           1
 R arginine            1.7          3           1
 S serine             19.8         35           3
 T threonine           0.6          1           1
 V valine              4.5          8           1
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-2 
KRTAP5-5              0.802   keratin associated protein 5-5 
KRTAP5-10             0.757   keratin associated protein 5-10 
KRTAP5-7              0.730   keratin associated protein 5-7 
KRTAP5-8              0.652   keratin associated protein 5-8 
KRTAP5-11             0.647   keratin associated protein 5-11 
KRTAP5-4              0.616   keratin associated protein 5-4 
KRTAP5-3              0.609   keratin associated protein 5-3 
KRTAP5-6              0.587   keratin associated protein 5-6 
KRTAP5-1              0.580   keratin associated protein 5-1 
KRTAP5-9              0.539   keratin associated protein 5-9 
KRTAP4-8              0.260   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.251   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.251   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.251   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.251   keratin associated protein 4.8 
KRTAP4-9              0.251   keratin associated protein 4-9 
KRTAP4-3              0.251   keratin associated protein 4-3 
KRTAP4-9              0.248   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.246   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.246   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.243   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-11             0.243   keratin associated protein 4-11 
KRTAP10-2             0.241   keratin associated protein 10-2 
KRTAP4-8              0.241   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.241   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.234   keratin associated protein 4-12 
KRTAP4-5              0.227   keratin associated protein 4-5 
KRTAP10-4             0.224   keratin associated protein 10-4 
KRTAP4-7              0.220   keratin associated protein 4-7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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