Guide to the Human Genome
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Name: KRTAP22-1 Sequence: fasta or formatted (48aa) NCBI GI: 31791012
Description:

keratin associated protein 22-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          2           1
 C cysteine           12.5          6           1
 D aspartate           2.1          1           1
 E glutamate           2.1          1           1
 F phenylalanine       6.2          3           1
 G glycine            22.9         11           2
 H histidine           2.1          1           1
 I isoleucine          0.0          0           0
 K lysine              2.1          1           1
 L leucine             4.2          2           1
 M methionine          2.1          1           1
 N asparagine          4.2          2           2
 P proline             2.1          1           1
 Q glutamine           2.1          1           1
 R arginine            2.1          1           1
 S serine             10.4          5           1
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          4.2          2           1
 Y tyrosine           14.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 22-1 
KRTAP20-1             0.323   keratin associated protein 20-1 
KRTAP20-2             0.281   keratin associated protein 20-2 
KRTAP19-7             0.260   keratin associated protein 19-7 
KRTAP19-2             0.208   keratin associated protein 19-2 
KRTAP19-3             0.208   keratin associated protein 19-3 
KRTAP19-8             0.177   keratin associated protein 19-8 
KRTAP19-5             0.156   keratin associated protein 19-5 
KRTAP19-6             0.146   keratin associated protein 19-6 
LOC647262             0.125   PREDICTED: hypothetical protein 
LOC731932             0.125   PREDICTED: hypothetical protein 
LOC731932             0.125   PREDICTED: hypothetical protein 
LOC731932             0.125   PREDICTED: hypothetical protein 
KRTAP21-2             0.125   keratin associated protein 21-2 
KRTAP19-4             0.115   keratin associated protein 19-4 
KRTAP6-3              0.115   keratin associated protein 6-3 
KRTAP6-1              0.104   keratin associated protein 6-1 
KRTAP19-1             0.104   keratin associated protein 19-1 
KRTAP21-1             0.094   keratin associated protein 21-1 
LOC100292523          0.094   PREDICTED: similar to Keratin-associated protein 22...
LOC100291010          0.094   PREDICTED: hypothetical protein XP_002348098 
LOC100288287          0.094   PREDICTED: hypothetical protein XP_002343781 
KRTAP6-2              0.073   keratin associated protein 6-2 
FBN1                  0.042   fibrillin 1 precursor 
LRP2                  0.042   low density lipoprotein-related protein 2 
MEGF6                 0.042   EGF-like-domain, multiple 3 
OCLN                  0.031   occludin 
FBN2                  0.031   fibrillin 2 precursor 
KRTAP20-3             0.031   keratin associated protein 20-3 
KRT10                 0.021   keratin 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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