Guide to the Human Genome
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Name: KRTAP6-1 Sequence: fasta or formatted (71aa) NCBI GI: 31791038
Description:

keratin associated protein 6-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           12.7          9           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       2.8          2           1
 G glycine            38.0         27           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             5.6          4           1
 M methionine          1.4          1           1
 N asparagine          1.4          1           1
 P proline             1.4          1           1
 Q glutamine           0.0          0           0
 R arginine            4.2          3           2
 S serine              8.5          6           1
 T threonine           1.4          1           1
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           22.5         16           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 6-1 
KRTAP6-2              0.570   keratin associated protein 6-2 
KRTAP6-3              0.543   keratin associated protein 6-3 
KRTAP19-3             0.344   keratin associated protein 19-3 
LOC647262             0.338   PREDICTED: hypothetical protein 
LOC731932             0.318   PREDICTED: hypothetical protein 
LOC731932             0.318   PREDICTED: hypothetical protein 
KRTAP19-5             0.318   keratin associated protein 19-5 
KRTAP19-1             0.311   keratin associated protein 19-1 
LOC731932             0.305   PREDICTED: hypothetical protein 
KRTAP19-8             0.291   keratin associated protein 19-8 
KRTAP21-2             0.291   keratin associated protein 21-2 
KRTAP21-1             0.291   keratin associated protein 21-1 
KRTAP19-4             0.278   keratin associated protein 19-4 
KRTAP19-7             0.258   keratin associated protein 19-7 
KRTAP20-1             0.245   keratin associated protein 20-1 
KRTAP20-2             0.245   keratin associated protein 20-2 
KRTAP19-6             0.205   keratin associated protein 19-6 
KRT1                  0.139   keratin 1 
LOR                   0.139   loricrin 
KRTAP5-5              0.132   keratin associated protein 5-5 
KRT9                  0.126   keratin 9 
TAF15                 0.126   TBP-associated factor 15 isoform 2 
TAF15                 0.126   TBP-associated factor 15 isoform 1 
KRT77                 0.113   keratin 77 
HNRNPA1               0.113   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA2B1             0.113   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.113   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
KRTAP5-4              0.113   keratin associated protein 5-4 
KRTAP17-1             0.113   keratin associated protein 17-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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