Guide to the Human Genome
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Name: KRTAP5-10 Sequence: fasta or formatted (202aa) NCBI GI: 60593040
Description:

keratin associated protein 5-10

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           32.7         66           3
 D aspartate           0.5          1           1
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine            29.2         59           2
 H histidine           0.0          0           0
 I isoleucine          0.5          1           1
 K lysine              5.4         11           1
 L leucine             0.0          0           0
 M methionine          0.5          1           1
 N asparagine          1.0          2           1
 P proline             4.0          8           1
 Q glutamine           3.0          6           1
 R arginine            0.0          0           0
 S serine             18.3         37           2
 T threonine           0.0          0           0
 V valine              4.0          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-10 
KRTAP5-4              0.839   keratin associated protein 5-4 
KRTAP5-5              0.766   keratin associated protein 5-5 
KRTAP5-1              0.700   keratin associated protein 5-1 
KRTAP5-3              0.694   keratin associated protein 5-3 
KRTAP5-8              0.615   keratin associated protein 5-8 
KRTAP5-7              0.596   keratin associated protein 5-7 
KRTAP5-2              0.547   keratin associated protein 5-2 
KRTAP5-11             0.538   keratin associated protein 5-11 
KRTAP5-9              0.472   keratin associated protein 5-9 
KRTAP5-6              0.420   keratin associated protein 5-6 
KRTAP10-4             0.207   keratin associated protein 10-4 
KRTAP4-9              0.205   keratin associated protein 4-9 
KRTAP4-3              0.205   keratin associated protein 4-3 
KRTAP4-9              0.203   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.201   PREDICTED: keratin associated protein 4-8 isoform 3...
KRTAP4-8              0.201   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.201   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.201   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.197   keratin associated protein 4-11 
KRTAP10-6             0.197   keratin associated protein 10-6 
KRTAP10-7             0.197   keratin associated protein 10-7 
KRTAP4-9              0.190   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.188   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.180   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.180   keratin associated protein 4.8 
KRTAP4-12             0.178   keratin associated protein 4-12 
KRTAP4-8              0.176   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.176   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-2             0.174   keratin associated protein 10-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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