Guide to the Human Genome
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Name: KRTAP19-4 Sequence: fasta or formatted (84aa) NCBI GI: 31791028
Description:

keratin associated protein 19-4

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            7.1          6           1
 D aspartate           1.2          1           1
 E glutamate           2.4          2           1
 F phenylalanine       6.0          5           1
 G glycine            27.4         23           2
 H histidine           0.0          0           0
 I isoleucine          3.6          3           1
 K lysine              2.4          2           1
 L leucine             7.1          6           2
 M methionine          1.2          1           1
 N asparagine          2.4          2           1
 P proline             2.4          2           1
 Q glutamine           0.0          0           0
 R arginine            7.1          6           2
 S serine              9.5          8           1
 T threonine           2.4          2           1
 V valine              1.2          1           1
 W tryptophan          0.0          0           0
 Y tyrosine           16.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 19-4 
KRTAP19-7             0.551   keratin associated protein 19-7 
KRTAP19-3             0.533   keratin associated protein 19-3 
KRTAP19-8             0.521   keratin associated protein 19-8 
KRTAP19-5             0.521   keratin associated protein 19-5 
KRTAP19-1             0.461   keratin associated protein 19-1 
KRTAP19-6             0.449   keratin associated protein 19-6 
KRTAP20-2             0.293   keratin associated protein 20-2 
KRTAP6-1              0.251   keratin associated protein 6-1 
KRTAP6-3              0.228   keratin associated protein 6-3 
KRTAP20-1             0.228   keratin associated protein 20-1 
KRTAP6-2              0.216   keratin associated protein 6-2 
KRTAP19-2             0.204   keratin associated protein 19-2 
LOC647262             0.180   PREDICTED: hypothetical protein 
KRTAP21-1             0.180   keratin associated protein 21-1 
LOC731932             0.174   PREDICTED: hypothetical protein 
LOC731932             0.174   PREDICTED: hypothetical protein 
LOC731932             0.174   PREDICTED: hypothetical protein 
KRTAP21-2             0.144   keratin associated protein 21-2 
KRTAP13-1             0.138   keratin associated protein 13-1 
KRT1                  0.132   keratin 1 
KRTAP20-3             0.126   keratin associated protein 20-3 
KRTAP13-2             0.120   keratin associated protein 13-2 
KRTAP5-5              0.120   keratin associated protein 5-5 
KRT5                  0.108   keratin 5 
KRTAP5-10             0.102   keratin associated protein 5-10 
KRTAP5-4              0.102   keratin associated protein 5-4 
KRTAP5-2              0.102   keratin associated protein 5-2 
DHX9                  0.096   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
HNRNPA3               0.090   heterogeneous nuclear ribonucleoprotein A3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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