Guide to the Human Genome
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Name: KRTAP19-6 Sequence: fasta or formatted (58aa) NCBI GI: 31791024
Description:

keratin associated protein 19-6

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           10.3          6           2
 D aspartate           0.0          0           0
 E glutamate           1.7          1           1
 F phenylalanine       5.2          3           1
 G glycine            36.2         21           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             3.4          2           1
 M methionine          1.7          1           1
 N asparagine          0.0          0           0
 P proline             1.7          1           1
 Q glutamine           0.0          0           0
 R arginine           10.3          6           1
 S serine              6.9          4           1
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           22.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 19-6 
KRTAP19-7             0.653   keratin associated protein 19-7 
KRTAP19-4             0.636   keratin associated protein 19-4 
KRTAP19-3             0.636   keratin associated protein 19-3 
KRTAP19-1             0.610   keratin associated protein 19-1 
KRTAP19-5             0.602   keratin associated protein 19-5 
KRTAP19-8             0.534   keratin associated protein 19-8 
KRTAP20-2             0.466   keratin associated protein 20-2 
KRTAP19-2             0.347   keratin associated protein 19-2 
KRTAP6-1              0.263   keratin associated protein 6-1 
KRTAP20-1             0.246   keratin associated protein 20-1 
KRTAP21-2             0.229   keratin associated protein 21-2 
KRTAP6-2              0.229   keratin associated protein 6-2 
KRTAP6-3              0.220   keratin associated protein 6-3 
LOC731932             0.203   PREDICTED: hypothetical protein 
LOC731932             0.203   PREDICTED: hypothetical protein 
LOC731932             0.203   PREDICTED: hypothetical protein 
LOC647262             0.186   PREDICTED: hypothetical protein 
KRTAP21-1             0.178   keratin associated protein 21-1 
KRTAP5-10             0.169   keratin associated protein 5-10 
KRTAP5-4              0.144   keratin associated protein 5-4 
KRTAP20-3             0.144   keratin associated protein 20-3 
KRTAP5-2              0.136   keratin associated protein 5-2 
KRTAP5-5              0.127   keratin associated protein 5-5 
KRTAP5-3              0.127   keratin associated protein 5-3 
KRT1                  0.119   keratin 1 
DHX9                  0.119   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
KRTAP5-1              0.119   keratin associated protein 5-1 
KRTAP22-1             0.119   keratin associated protein 22-1 
OCLN                  0.110   occludin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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