Guide to the Human Genome
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Name: KRTAP6-2 Sequence: fasta or formatted (62aa) NCBI GI: 31791040
Description:

keratin associated protein 6-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           14.5          9           2
 D aspartate           1.6          1           1
 E glutamate           1.6          1           1
 F phenylalanine       3.2          2           2
 G glycine            32.3         20           1
 H histidine           3.2          2           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             3.2          2           1
 M methionine          1.6          1           1
 N asparagine          1.6          1           1
 P proline             0.0          0           0
 Q glutamine           0.0          0           0
 R arginine            3.2          2           1
 S serine              9.7          6           2
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           24.2         15           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 6-2 
KRTAP6-1              0.652   keratin associated protein 6-1 
KRTAP6-3              0.492   keratin associated protein 6-3 
KRTAP19-3             0.333   keratin associated protein 19-3 
LOC647262             0.311   PREDICTED: hypothetical protein 
KRTAP19-1             0.303   keratin associated protein 19-1 
KRTAP21-2             0.303   keratin associated protein 21-2 
KRTAP21-1             0.288   keratin associated protein 21-1 
KRTAP19-5             0.280   keratin associated protein 19-5 
KRTAP19-7             0.280   keratin associated protein 19-7 
LOC731932             0.273   PREDICTED: hypothetical protein 
LOC731932             0.273   PREDICTED: hypothetical protein 
KRTAP19-4             0.273   keratin associated protein 19-4 
KRTAP20-2             0.265   keratin associated protein 20-2 
LOC731932             0.258   PREDICTED: hypothetical protein 
KRTAP19-8             0.235   keratin associated protein 19-8 
KRTAP20-1             0.205   keratin associated protein 20-1 
KRTAP19-6             0.205   keratin associated protein 19-6 
KRTAP20-3             0.152   keratin associated protein 20-3 
KRT1                  0.114   keratin 1 
HNRNPA3               0.098   heterogeneous nuclear ribonucleoprotein A3 
KRTAP7-1              0.091   keratin associated protein 7-1 
KRT9                  0.091   keratin 9 
LOC100294395          0.076   PREDICTED: similar to serum response factor-related...
KRTAP19-2             0.076   keratin associated protein 19-2 
KRT77                 0.076   keratin 77 
KRT10                 0.076   keratin 10 
KRTAP17-1             0.076   keratin associated protein 17-1 
KRTAP5-5              0.076   keratin associated protein 5-5 
KRT16                 0.068   keratin 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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