Guide to the Human Genome
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Name: KRTAP19-1 Sequence: fasta or formatted (90aa) NCBI GI: 31791030
Description:

keratin associated protein 19-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            7.8          7           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       7.8          7           1
 G glycine            42.2         38           2
 H histidine           1.1          1           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             2.2          2           1
 M methionine          1.1          1           1
 N asparagine          1.1          1           1
 P proline             1.1          1           1
 Q glutamine           0.0          0           0
 R arginine            3.3          3           2
 S serine             12.2         11           1
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           20.0         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 19-1 
KRTAP19-3             0.760   keratin associated protein 19-3 
KRTAP19-5             0.500   keratin associated protein 19-5 
KRTAP19-8             0.401   keratin associated protein 19-8 
KRTAP19-7             0.396   keratin associated protein 19-7 
KRTAP19-4             0.396   keratin associated protein 19-4 
KRTAP19-6             0.333   keratin associated protein 19-6 
KRTAP20-2             0.318   keratin associated protein 20-2 
LOC647262             0.302   PREDICTED: hypothetical protein 
KRTAP6-3              0.271   keratin associated protein 6-3 
KRTAP21-1             0.260   keratin associated protein 21-1 
LOC731932             0.245   PREDICTED: hypothetical protein 
LOC731932             0.245   PREDICTED: hypothetical protein 
LOC731932             0.245   PREDICTED: hypothetical protein 
KRTAP6-1              0.245   keratin associated protein 6-1 
KRTAP21-2             0.234   keratin associated protein 21-2 
KRTAP19-2             0.208   keratin associated protein 19-2 
KRTAP6-2              0.208   keratin associated protein 6-2 
KRT1                  0.198   keratin 1 
HNRNPA3               0.198   heterogeneous nuclear ribonucleoprotein A3 
FAM98B                0.198   family with sequence similarity 98, member B isofor...
KRT9                  0.193   keratin 9 
KRTAP20-1             0.188   keratin associated protein 20-1 
KRT10                 0.182   keratin 10 
HNRNPA2B1             0.177   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.177   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA0               0.177   heterogeneous nuclear ribonucleoprotein A0 
KRT3                  0.177   keratin 3 
TAF15                 0.172   TBP-associated factor 15 isoform 2 
TAF15                 0.172   TBP-associated factor 15 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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