Guide to the Human Genome
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Name: KRTAP21-2 Sequence: fasta or formatted (83aa) NCBI GI: 31791016
Description:

keratin associated protein 21-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           21.7         18           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine            31.3         26           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             1.2          1           1
 M methionine          1.2          1           1
 N asparagine          2.4          2           1
 P proline             1.2          1           1
 Q glutamine           0.0          0           0
 R arginine            6.0          5           2
 S serine             13.3         11           3
 T threonine           1.2          1           1
 V valine              0.0          0           0
 W tryptophan          1.2          1           1
 Y tyrosine           19.3         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 21-2 
LOC731932             0.606   PREDICTED: hypothetical protein 
LOC731932             0.606   PREDICTED: hypothetical protein 
LOC731932             0.574   PREDICTED: hypothetical protein 
LOC647262             0.564   PREDICTED: hypothetical protein 
KRTAP21-1             0.543   keratin associated protein 21-1 
KRTAP6-3              0.282   keratin associated protein 6-3 
KRTAP19-3             0.250   keratin associated protein 19-3 
KRTAP5-5              0.234   keratin associated protein 5-5 
KRTAP19-1             0.234   keratin associated protein 19-1 
KRTAP6-1              0.234   keratin associated protein 6-1 
KRTAP6-2              0.213   keratin associated protein 6-2 
KRTAP5-4              0.213   keratin associated protein 5-4 
KRTAP19-5             0.207   keratin associated protein 19-5 
KRTAP19-8             0.202   keratin associated protein 19-8 
KRTAP5-2              0.191   keratin associated protein 5-2 
KRTAP5-10             0.186   keratin associated protein 5-10 
KRTAP20-2             0.186   keratin associated protein 20-2 
KRTAP5-1              0.181   keratin associated protein 5-1 
KRTAP17-1             0.176   keratin associated protein 17-1 
KRTAP19-2             0.170   keratin associated protein 19-2 
KRTAP20-1             0.160   keratin associated protein 20-1 
KRT16                 0.160   keratin 16 
KRTAP5-7              0.149   keratin associated protein 5-7 
KRTAP19-7             0.149   keratin associated protein 19-7 
KRT9                  0.144   keratin 9 
KRTAP19-6             0.144   keratin associated protein 19-6 
KRTAP5-3              0.138   keratin associated protein 5-3 
KRTAP5-11             0.138   keratin associated protein 5-11 
KRT77                 0.128   keratin 77 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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