Guide to the Human Genome
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Name: KRTAP5-3 Sequence: fasta or formatted (238aa) NCBI GI: 60593036
Description:

keratin associated protein 5-3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.4          1           1
 C cysteine           33.2         79           3
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.4          1           1
 G glycine            20.2         48           2
 H histidine           0.0          0           0
 I isoleucine          0.8          2           1
 K lysine              5.9         14           1
 L leucine             0.0          0           0
 M methionine          0.4          1           1
 N asparagine          0.0          0           0
 P proline             5.0         12           1
 Q glutamine           3.8          9           1
 R arginine            0.4          1           1
 S serine             24.8         59           3
 T threonine           0.0          0           0
 V valine              3.8          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-3 
KRTAP5-4              0.687   keratin associated protein 5-4 
KRTAP5-5              0.623   keratin associated protein 5-5 
KRTAP5-1              0.593   keratin associated protein 5-1 
KRTAP5-10             0.587   keratin associated protein 5-10 
KRTAP5-8              0.566   keratin associated protein 5-8 
KRTAP5-7              0.473   keratin associated protein 5-7 
KRTAP5-11             0.441   keratin associated protein 5-11 
KRTAP5-2              0.432   keratin associated protein 5-2 
KRTAP5-9              0.432   keratin associated protein 5-9 
KRTAP5-6              0.342   keratin associated protein 5-6 
KRTAP10-4             0.285   keratin associated protein 10-4 
KRTAP4-8              0.278   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.278   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.276   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-3              0.276   keratin associated protein 4-3 
KRTAP10-6             0.276   keratin associated protein 10-6 
KRTAP4-9              0.269   keratin associated protein 4-9 
KRTAP10-7             0.269   keratin associated protein 10-7 
KRTAP4-11             0.262   keratin associated protein 4-11 
KRTAP4-9              0.260   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.253   keratin associated protein 4-12 
KRTAP4-8              0.251   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.251   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.251   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.251   keratin associated protein 4.8 
KRTAP10-5             0.249   keratin associated protein 10-5 
KRTAP10-2             0.247   keratin associated protein 10-2 
KRTAP10-9             0.247   keratin associated protein 10-9 
KRTAP4-8              0.246   PREDICTED: keratin associated protein 4-8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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