Guide to the Human Genome
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Name: LOC731932 Sequence: fasta or formatted (93aa) NCBI GI: 169206147
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {123aa} PREDICTED: hypothetical protein
alt mRNA {93aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           18.3         17           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       2.2          2           1
 G glycine            35.5         33           1
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine          1.1          1           1
 N asparagine          2.2          2           1
 P proline             1.1          1           1
 Q glutamine           0.0          0           0
 R arginine            3.2          3           2
 S serine             12.9         12           2
 T threonine           3.2          3           1
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           20.4         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC731932             1.000   PREDICTED: hypothetical protein 
LOC731932             0.976   PREDICTED: hypothetical protein 
LOC647262             0.880   PREDICTED: hypothetical protein 
KRTAP21-1             0.656   keratin associated protein 21-1 
KRTAP21-2             0.545   keratin associated protein 21-2 
KRTAP6-3              0.321   keratin associated protein 6-3 
KRTAP6-1              0.230   keratin associated protein 6-1 
KRTAP19-1             0.225   keratin associated protein 19-1 
KRTAP19-3             0.215   keratin associated protein 19-3 
KRT13                 0.187   keratin 13 isoform b 
KRT13                 0.187   keratin 13 isoform a 
KRTAP5-5              0.187   keratin associated protein 5-5 
KRT16                 0.182   keratin 16 
KRT9                  0.177   keratin 9 
KRTAP6-2              0.172   keratin associated protein 6-2 
KRTAP20-2             0.172   keratin associated protein 20-2 
KRTAP19-5             0.167   keratin associated protein 19-5 
KRT10                 0.153   keratin 10 
KRTAP5-4              0.153   keratin associated protein 5-4 
KRTAP5-2              0.148   keratin associated protein 5-2 
LOR                   0.148   loricrin 
KRT3                  0.148   keratin 3 
KRTAP19-8             0.144   keratin associated protein 19-8 
KRTAP5-1              0.144   keratin associated protein 5-1 
TAF15                 0.139   TBP-associated factor 15 isoform 2 
TAF15                 0.139   TBP-associated factor 15 isoform 1 
KRTAP19-4             0.139   keratin associated protein 19-4 
KRTAP20-1             0.139   keratin associated protein 20-1 
KRT76                 0.139   keratin 76 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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