Guide to the Human Genome
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Name: DHX9 Sequence: fasta or formatted (1270aa) NCBI GI: 100913206
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 9

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         86           3
 C cysteine            1.8         23           1
 D aspartate           4.4         56           3
 E glutamate           7.2         91           2
 F phenylalanine       4.0         51           2
 G glycine             9.4        119           4
 H histidine           2.0         26           1
 I isoleucine          6.1         77           2
 K lysine              5.1         65           4
 L leucine             8.3        105           3
 M methionine          2.4         31           2
 N asparagine          5.0         63           2
 P proline             5.7         72           3
 Q glutamine           4.3         55           1
 R arginine            5.8         74           2
 S serine              5.8         74           2
 T threonine           4.8         61           2
 V valine              6.5         82           2
 W tryptophan          0.9         11           1
 Y tyrosine            3.8         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX36                 0.189   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX36                 0.180   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX57                 0.170   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
DHX29                 0.166   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX30                 0.149   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.149   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX34                 0.112   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
TDRD9                 0.111   tudor domain containing 9 
YTHDC2                0.095   YTH domain containing 2 
DHX35                 0.091   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX8                  0.090   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX16                 0.088   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX15                 0.088   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX33                 0.085   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX40                 0.079   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
LOC100134387          0.063   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX32                 0.052   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DHX38                 0.052   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX37                 0.042   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DQX1                  0.036   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
KRT9                  0.027   keratin 9 
TAF15                 0.025   TBP-associated factor 15 isoform 2 
TAF15                 0.025   TBP-associated factor 15 isoform 1 
KRT10                 0.024   keratin 10 
FAM98B                0.024   family with sequence similarity 98, member B isofor...
KRT1                  0.023   keratin 1 
LOR                   0.019   loricrin 
KRT3                  0.019   keratin 3 
HNRNPA1               0.018   heterogeneous nuclear ribonucleoprotein A1 isoform b...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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