Guide to the Human Genome
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Name: KRTAP19-8 Sequence: fasta or formatted (63aa) NCBI GI: 149944573
Description:

keratin associated protein 19-8

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          1           1
 C cysteine            6.3          4           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       7.9          5           1
 G glycine            34.9         22           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             4.8          3           1
 M methionine          1.6          1           1
 N asparagine          0.0          0           0
 P proline             1.6          1           1
 Q glutamine           0.0          0           0
 R arginine            6.3          4           2
 S serine              7.9          5           1
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          1.6          1           1
 Y tyrosine           25.4         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 19-8 
KRTAP19-3             0.690   keratin associated protein 19-3 
KRTAP19-7             0.690   keratin associated protein 19-7 
KRTAP19-4             0.674   keratin associated protein 19-4 
KRTAP19-5             0.651   keratin associated protein 19-5 
KRTAP19-1             0.597   keratin associated protein 19-1 
KRTAP19-6             0.488   keratin associated protein 19-6 
KRTAP20-2             0.457   keratin associated protein 20-2 
KRTAP6-1              0.341   keratin associated protein 6-1 
KRTAP21-2             0.295   keratin associated protein 21-2 
KRTAP20-1             0.295   keratin associated protein 20-1 
KRTAP6-3              0.264   keratin associated protein 6-3 
KRTAP6-2              0.240   keratin associated protein 6-2 
KRTAP19-2             0.240   keratin associated protein 19-2 
LOC731932             0.233   PREDICTED: hypothetical protein 
LOC731932             0.233   PREDICTED: hypothetical protein 
LOC731932             0.233   PREDICTED: hypothetical protein 
LOC647262             0.233   PREDICTED: hypothetical protein 
KRTAP20-3             0.202   keratin associated protein 20-3 
KRTAP21-1             0.186   keratin associated protein 21-1 
KRTAP13-1             0.171   keratin associated protein 13-1 
KRT1                  0.163   keratin 1 
OCLN                  0.155   occludin 
KRT5                  0.155   keratin 5 
HNRNPA3               0.155   heterogeneous nuclear ribonucleoprotein A3 
KRTAP13-2             0.147   keratin associated protein 13-2 
FAM98B                0.140   family with sequence similarity 98, member B isofor...
KRTAP22-1             0.132   keratin associated protein 22-1 
KRT9                  0.132   keratin 9 
HNRNPAB               0.132   heterogeneous nuclear ribonucleoprotein A/B isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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