Guide to the Human Genome
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Name: LOC731932 Sequence: fasta or formatted (123aa) NCBI GI: 169205935
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {93aa} PREDICTED: hypothetical protein
alt prot {93aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4          3           2
 C cysteine           13.0         16           1
 D aspartate           1.6          2           2
 E glutamate           3.3          4           1
 F phenylalanine       2.4          3           1
 G glycine            27.6         34           1
 H histidine           0.0          0           0
 I isoleucine          1.6          2           1
 K lysine              0.8          1           1
 L leucine             1.6          2           1
 M methionine          0.8          1           1
 N asparagine          1.6          2           1
 P proline             4.1          5           2
 Q glutamine           0.0          0           0
 R arginine            3.3          4           2
 S serine             10.6         13           2
 T threonine           5.7          7           1
 V valine              2.4          3           1
 W tryptophan          0.0          0           0
 Y tyrosine           17.1         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC731932             0.761   PREDICTED: hypothetical protein 
LOC731932             0.761   PREDICTED: hypothetical protein 
LOC647262             0.668   PREDICTED: hypothetical protein 
KRTAP21-1             0.493   keratin associated protein 21-1 
KRTAP21-2             0.403   keratin associated protein 21-2 
KRTAP6-3              0.213   keratin associated protein 6-3 
KRTAP19-1             0.175   keratin associated protein 19-1 
KRTAP6-1              0.172   keratin associated protein 6-1 
KRTAP19-3             0.168   keratin associated protein 19-3 
KRTAP5-5              0.146   keratin associated protein 5-5 
KRT13                 0.146   keratin 13 isoform b 
KRT13                 0.146   keratin 13 isoform a 
KRT16                 0.142   keratin 16 
KRT9                  0.138   keratin 9 
KRTAP20-2             0.134   keratin associated protein 20-2 
KRTAP19-5             0.131   keratin associated protein 19-5 
KRTAP6-2              0.127   keratin associated protein 6-2 
KRT10                 0.119   keratin 10 
KRTAP5-4              0.119   keratin associated protein 5-4 
LOR                   0.116   loricrin 
KRTAP5-2              0.116   keratin associated protein 5-2 
KRT3                  0.116   keratin 3 
KRTAP19-8             0.112   keratin associated protein 19-8 
KRT1                  0.108   keratin 1 
TAF15                 0.108   TBP-associated factor 15 isoform 2 
TAF15                 0.108   TBP-associated factor 15 isoform 1 
KRTAP19-4             0.108   keratin associated protein 19-4 
KRTAP20-1             0.108   keratin associated protein 20-1 
KRT76                 0.108   keratin 76 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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