LYPD1 1911

Name: LYPD1	Sequence: fasta or formatted (89aa)		NCBI GI: 116812604
Description: LY6/PLAUR domain containing 1 isoform b		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [141aa] LY6/PLAUR domain containing 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 10 2 C cysteine 10.1 9 2 D aspartate 0.0 0 0 E glutamate 2.2 2 1 F phenylalanine 3.4 3 1 G glycine 6.7 6 1 H histidine 1.1 1 1 I isoleucine 4.5 4 1 K lysine 6.7 6 2 L leucine 10.1 9 1 M methionine 3.4 3 1 N asparagine 3.4 3 1 P proline 5.6 5 1 Q glutamine 3.4 3 1 R arginine 5.6 5 1 S serine 14.6 13 2 T threonine 3.4 3 2 V valine 2.2 2 1 W tryptophan 0.0 0 0 Y tyrosine 2.2 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LY6/PLAUR domain containing 1 isoform b LYPD1 1.000 LY6/PLAUR domain containing 1 isoform a CRB2 0.050 crumbs homolog 2 LOC100293868 0.043 PREDICTED: hypothetical protein LOC100288795 0.043 PREDICTED: hypothetical protein XP_002343543 KRTAP1-3 0.043 keratin associated protein 1-3 DLL4 0.043 delta-like 4 protein precursor KRTAP1-5 0.043 keratin associated protein 1.5 KRTAP1-1 0.043 keratin associated protein 1-1 PLAUR 0.031 plasminogen activator, urokinase receptor isoform 3 ... PLAUR 0.031 plasminogen activator, urokinase receptor isoform 1 p... NOTCH3 0.031 Notch homolog 3 KRTAP10-4 0.031 keratin associated protein 10-4 KRTAP10-9 0.031 keratin associated protein 10-9 KRTAP10-7 0.031 keratin associated protein 10-7 NOTCH4 0.031 notch4 preproprotein SHF 0.025 Src homology 2 domain containing F LYPD6 0.025 LY6/PLAUR domain containing 6 NOTCH1 0.019 notch1 preproprotein NOTCH2 0.019 notch 2 preproprotein KRTAP10-6 0.019 keratin associated protein 10-6 LYPD6B 0.019 LY6/PLAUR domain containing 6B JAG1 0.012 jagged 1 precursor DLL1 0.012 delta-like 1 LOC100130599 0.012 PREDICTED: hypothetical protein LOC100130599 0.012 PREDICTED: similar to Keratin-associated protein 10... MEGF8 0.012 multiple EGF-like-domains 8 KRTAP10-5 0.012 keratin associated protein 10-5 JAG2 0.012 jagged 2 isoform b precursor JAG2 0.012 jagged 2 isoform a precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.