Guide to the Human Genome
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Name: KRTAP10-9 Sequence: fasta or formatted (292aa) NCBI GI: 154759251
Description:

keratin associated protein 10-9

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         20           2
 C cysteine           25.0         73           2
 D aspartate           1.4          4           2
 E glutamate           1.4          4           1
 F phenylalanine       0.3          1           1
 G glycine             1.7          5           1
 H histidine           0.0          0           0
 I isoleucine          0.7          2           1
 K lysine              1.7          5           1
 L leucine             2.4          7           2
 M methionine          0.7          2           1
 N asparagine          0.0          0           0
 P proline            12.0         35           2
 Q glutamine           7.9         23           2
 R arginine            3.1          9           1
 S serine             19.5         57           3
 T threonine           4.5         13           2
 V valine              8.2         24           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-9 
KRTAP10-1             0.822   keratin associated protein 10-1 
KRTAP10-11            0.817   keratin associated protein 10-11 
KRTAP10-5             0.757   keratin associated protein 10-5 
KRTAP10-7             0.731   keratin associated protein 10-7 
KRTAP10-6             0.722   keratin associated protein 10-6 
KRTAP10-2             0.720   keratin associated protein 10-2 
KRTAP10-4             0.700   keratin associated protein 10-4 
KRTAP10-12            0.523   keratin associated protein 10-12 
KRTAP10-10            0.506   keratin associated protein 10-10 
KRTAP10-8             0.480   keratin associated protein 10-8 
KRTAP10-3             0.466   keratin associated protein 10-3 
LOC100130599          0.386   PREDICTED: hypothetical protein 
LOC100130599          0.382   PREDICTED: similar to Keratin-associated protein 10...
LOC100131696          0.312   PREDICTED: keratin associated protein 
LOC100288060          0.312   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.311   PREDICTED: keratin associated protein 
KRTAP4-9              0.285   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.283   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.283   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.282   keratin associated protein 4-9 
KRTAP4-12             0.269   keratin associated protein 4-12 
KRTAP4-9              0.268   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-3              0.268   keratin associated protein 4-3 
KRTAP4-11             0.260   keratin associated protein 4-11 
KRTAP4-8              0.255   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.254   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.254   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.246   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.246   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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