Guide to the Human Genome
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Name: PLAUR Sequence: fasta or formatted (290aa) NCBI GI: 53829381
Description:

plasminogen activator, urokinase receptor isoform 3 precursor

Referenced in:

Coagulation
Additional Genes in Development

Other entries for this name:
alt prot [335aa] plasminogen activator, urokinase receptor isoform 1 precursor
alt prot [281aa] plasminogen activator, urokinase receptor isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         12           2
 C cysteine            8.3         24           2
 D aspartate           3.4         10           1
 E glutamate           7.6         22           2
 F phenylalanine       0.7          2           1
 G glycine             8.3         24           2
 H histidine           4.1         12           1
 I isoleucine          2.4          7           1
 K lysine              2.4          7           1
 L leucine            12.1         35           5
 M methionine          2.8          8           1
 N asparagine          3.8         11           1
 P proline             4.1         12           2
 Q glutamine           4.8         14           1
 R arginine            5.9         17           1
 S serine              8.6         25           2
 T threonine           7.9         23           2
 V valine              4.8         14           2
 W tryptophan          1.7          5           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plasminogen activator, urokinase receptor isoform 3 ... 
PLAUR                 0.963   plasminogen activator, urokinase receptor isoform 1 p...
PLAUR                 0.664   plasminogen activator, urokinase receptor isoform 2 ...
LOC390940             0.025   PREDICTED: similar to R28379_1 
LOC390940             0.025   PREDICTED: similar to R28379_1 
LOC390940             0.025   PREDICTED: similar to R28379_1 
LYPD3                 0.025   GPI-anchored metastasis-associated protein homolog [...
LYPD1                 0.022   LY6/PLAUR domain containing 1 isoform a 
TRIM39                0.017   tripartite motif-containing 39 isoform 2 
TRIM39                0.017   tripartite motif-containing 39 isoform 1 
LYPD5                 0.017   LY6/PLAUR domain containing 5 isoform A 
LYPD5                 0.017   LY6/PLAUR domain containing 5 isoform B 
TNFRSF10B             0.013   tumor necrosis factor receptor superfamily, member ...
AMMECR1L              0.013   AMME chromosomal region gene 1-like 
STAB2                 0.012   stabilin 2 precursor 
CSF3R                 0.010   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.010   colony stimulating factor 3 receptor isoform c precu...
CSF3R                 0.010   colony stimulating factor 3 receptor isoform b precu...
CSF3R                 0.010   colony stimulating factor 3 receptor isoform a precur...
TNFRSF10B             0.008   tumor necrosis factor receptor superfamily, member ...
FLG2                  0.008   filaggrin family member 2 
LYNX1                 0.008   secreted Ly6/uPAR related protein 2 isoform b 
LYPD1                 0.008   LY6/PLAUR domain containing 1 isoform b 
ACVR1C                0.007   activin A receptor, type IC isoform 2 
ACVR1C                0.007   activin A receptor, type IC isoform 1 
RGPD8                 0.007   PREDICTED: RANBP2-like and GRIP domain containing 8...
LYNX1                 0.007   Ly-6 neurotoxin-like protein 1 isoform a 
CNTN3                 0.007   contactin 3 
TTN                   0.005   titin isoform N2-A 
LTBP3                 0.005   latent transforming growth factor beta binding prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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