Guide to the Human Genome
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Name: LOC100130599 Sequence: fasta or formatted (312aa) NCBI GI: 239752100
Description:

PREDICTED: hypothetical protein

Referenced in:

Keratins

Other entries for this name:
alt prot [312aa] PREDICTED: similar to Keratin-associated protein 10-8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         26           2
 C cysteine           17.9         56           2
 D aspartate           1.9          6           2
 E glutamate           2.2          7           1
 F phenylalanine       1.0          3           1
 G glycine             2.9          9           2
 H histidine           1.6          5           1
 I isoleucine          0.6          2           1
 K lysine              1.9          6           1
 L leucine             6.4         20           2
 M methionine          1.0          3           1
 N asparagine          1.3          4           1
 P proline            14.1         44           5
 Q glutamine           7.1         22           2
 R arginine            3.5         11           1
 S serine             16.3         51           3
 T threonine           3.8         12           1
 V valine              5.4         17           1
 W tryptophan          1.9          6           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100130599          0.991   PREDICTED: similar to Keratin-associated protein 10...
KRTAP10-3             0.488   keratin associated protein 10-3 
KRTAP10-8             0.431   keratin associated protein 10-8 
KRTAP10-12            0.419   keratin associated protein 10-12 
KRTAP10-10            0.403   keratin associated protein 10-10 
KRTAP10-7             0.396   keratin associated protein 10-7 
KRTAP10-11            0.390   keratin associated protein 10-11 
KRTAP10-2             0.387   keratin associated protein 10-2 
KRTAP10-5             0.387   keratin associated protein 10-5 
KRTAP10-1             0.387   keratin associated protein 10-1 
KRTAP10-9             0.381   keratin associated protein 10-9 
KRTAP10-6             0.381   keratin associated protein 10-6 
KRTAP10-4             0.358   keratin associated protein 10-4 
KRTAP4-9              0.231   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.229   keratin associated protein 4-9 
KRTAP4-12             0.226   keratin associated protein 4-12 
KRTAP4-3              0.220   keratin associated protein 4-3 
KRTAP4-8              0.219   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.219   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.218   keratin associated protein 4-11 
KRTAP4-8              0.216   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.216   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.210   PREDICTED: keratin associated protein 4-8 
KRTAP4-9              0.209   PREDICTED: keratin associated protein 4-9 isoform 2...
LOC100131696          0.206   PREDICTED: keratin associated protein 
LOC100131696          0.206   PREDICTED: keratin associated protein 
LOC100288060          0.206   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-8              0.199   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.199   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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