Guide to the Human Genome
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Name: KRTAP10-4 Sequence: fasta or formatted (401aa) NCBI GI: 38490568
Description:

keratin associated protein 10-4

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         20           1
 C cysteine           27.4        110           2
 D aspartate           1.7          7           2
 E glutamate           1.2          5           1
 F phenylalanine       0.0          0           0
 G glycine             2.2          9           1
 H histidine           0.0          0           0
 I isoleucine          1.0          4           1
 K lysine              2.0          8           1
 L leucine             2.5         10           2
 M methionine          0.2          1           1
 N asparagine          0.0          0           0
 P proline            11.5         46           2
 Q glutamine           9.0         36           2
 R arginine            1.5          6           1
 S serine             21.4         86           3
 T threonine           3.5         14           2
 V valine              9.2         37           1
 W tryptophan          0.2          1           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-4 
KRTAP10-7             0.737   keratin associated protein 10-7 
KRTAP10-6             0.726   keratin associated protein 10-6 
KRTAP10-1             0.470   keratin associated protein 10-1 
KRTAP10-11            0.454   keratin associated protein 10-11 
KRTAP10-5             0.449   keratin associated protein 10-5 
KRTAP10-9             0.441   keratin associated protein 10-9 
KRTAP10-12            0.412   keratin associated protein 10-12 
KRTAP10-2             0.390   keratin associated protein 10-2 
KRTAP10-8             0.367   keratin associated protein 10-8 
KRTAP10-10            0.316   keratin associated protein 10-10 
KRTAP10-3             0.307   keratin associated protein 10-3 
LOC100131696          0.285   PREDICTED: keratin associated protein 
LOC100131696          0.282   PREDICTED: keratin associated protein 
LOC100288060          0.282   PREDICTED: hypothetical protein XP_002343557 
LOC100130599          0.270   PREDICTED: hypothetical protein 
LOC100130599          0.266   PREDICTED: similar to Keratin-associated protein 10...
KRTAP4-8              0.212   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.212   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.201   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-12             0.201   keratin associated protein 4-12 
KRTAP4-9              0.199   keratin associated protein 4-9 
KRTAP4-3              0.190   keratin associated protein 4-3 
KRTAP4-8              0.185   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.185   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.185   keratin associated protein 4-11 
KRTAP4-9              0.183   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.182   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.177   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.177   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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