Guide to the Human Genome
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Name: KRTAP1-5 Sequence: fasta or formatted (174aa) NCBI GI: 13994360
Description:

keratin associated protein 1.5

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          3           1
 C cysteine           24.1         42           3
 D aspartate           0.6          1           1
 E glutamate           3.4          6           1
 F phenylalanine       2.9          5           1
 G glycine             9.2         16           3
 H histidine           1.1          2           2
 I isoleucine          2.9          5           1
 K lysine              0.0          0           0
 L leucine             1.1          2           1
 M methionine          0.6          1           1
 N asparagine          0.0          0           0
 P proline             8.6         15           2
 Q glutamine           6.9         12           1
 R arginine            4.0          7           1
 S serine             19.0         33           3
 T threonine           8.0         14           1
 V valine              2.9          5           2
 W tryptophan          0.6          1           1
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 1.5 
KRTAP1-3              0.851   keratin associated protein 1-3 
KRTAP1-1              0.804   keratin associated protein 1-1 
KRTAP1-4              0.539   PREDICTED: keratin associated protein 1-4 
KRTAP1-4              0.539   PREDICTED: keratin associated protein 1-4 
KRTAP4-8              0.369   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.369   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.358   keratin associated protein 4-9 
KRTAP4-9              0.356   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.356   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.353   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.353   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.345   keratin associated protein 4-11 
KRTAP4-8              0.345   PREDICTED: keratin associated protein 4-8 
KRTAP4-3              0.343   keratin associated protein 4-3 
KRTAP4-12             0.343   keratin associated protein 4-12 
KRTAP4-5              0.327   keratin associated protein 4-5 
KRTAP4-8              0.320   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.320   keratin associated protein 4.8 
KRTAP4-8              0.320   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.320   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-4              0.314   keratin associated protein 4.4 
KRTAP9-2              0.296   keratin associated protein 9.2 
LOC728318             0.289   PREDICTED: hypothetical protein 
LOC728318             0.284   PREDICTED: hypothetical protein 
LOC728318             0.284   PREDICTED: hypothetical protein 
KRTAP9-8              0.284   keratin associated protein 9.8 
KRTAP4-2              0.276   keratin associated protein 4-2 
KRTAP10-7             0.276   keratin associated protein 10-7 
LOC728341             0.276   PREDICTED: keratin-associated protein 9-2-like 1-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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