Guide to the Human Genome
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Name: KRTAP10-6 Sequence: fasta or formatted (365aa) NCBI GI: 148727298
Description:

keratin associated protein 10-6

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         20           2
 C cysteine           26.6         97           2
 D aspartate           1.9          7           2
 E glutamate           1.4          5           1
 F phenylalanine       0.0          0           0
 G glycine             2.5          9           1
 H histidine           0.5          2           1
 I isoleucine          0.3          1           1
 K lysine              1.4          5           1
 L leucine             2.7         10           2
 M methionine          0.8          3           1
 N asparagine          0.0          0           0
 P proline            10.4         38           2
 Q glutamine           8.2         30           2
 R arginine            1.6          6           1
 S serine             22.2         81           3
 T threonine           4.7         17           1
 V valine              8.5         31           1
 W tryptophan          0.3          1           1
 Y tyrosine            0.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-6 
KRTAP10-7             0.879   keratin associated protein 10-7 
KRTAP10-4             0.830   keratin associated protein 10-4 
KRTAP10-12            0.467   keratin associated protein 10-12 
KRTAP10-10            0.463   keratin associated protein 10-10 
KRTAP10-11            0.435   keratin associated protein 10-11 
KRTAP10-1             0.430   keratin associated protein 10-1 
KRTAP10-9             0.427   keratin associated protein 10-9 
KRTAP10-2             0.400   keratin associated protein 10-2 
KRTAP10-5             0.395   keratin associated protein 10-5 
KRTAP10-8             0.390   keratin associated protein 10-8 
KRTAP10-3             0.331   keratin associated protein 10-3 
LOC100131696          0.286   PREDICTED: keratin associated protein 
LOC100131696          0.285   PREDICTED: keratin associated protein 
LOC100288060          0.285   PREDICTED: hypothetical protein XP_002343557 
LOC100130599          0.270   PREDICTED: hypothetical protein 
LOC100130599          0.267   PREDICTED: similar to Keratin-associated protein 10...
KRTAP4-8              0.236   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.236   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.227   keratin associated protein 4-12 
KRTAP4-9              0.220   keratin associated protein 4-9 
KRTAP4-9              0.216   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.214   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.214   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.211   keratin associated protein 4-3 
KRTAP4-11             0.200   keratin associated protein 4-11 
KRTAP4-8              0.198   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.196   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.196   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.196   PREDICTED: keratin associated protein 4-9 isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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