LOC100287077 17170

Name: LOC100287077	Sequence: fasta or formatted (154aa)		NCBI GI: 239742265
Description: PREDICTED: hypothetical protein XP_002342467		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 8 1 C cysteine 1.3 2 1 D aspartate 5.8 9 3 E glutamate 3.2 5 1 F phenylalanine 1.3 2 1 G glycine 13.6 21 2 H histidine 1.9 3 1 I isoleucine 1.9 3 1 K lysine 1.9 3 1 L leucine 7.8 12 1 M methionine 1.9 3 1 N asparagine 2.6 4 1 P proline 12.3 19 3 Q glutamine 7.1 11 2 R arginine 7.1 11 2 S serine 6.5 10 1 T threonine 3.9 6 1 V valine 10.4 16 2 W tryptophan 3.9 6 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342467 BCL9L 0.033 B-cell CLL/lymphoma 9-like COL5A1 0.033 alpha 1 type V collagen preproprotein LOC100291212 0.029 PREDICTED: hypothetical protein XP_002347943 COL11A1 0.029 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.029 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.029 alpha 1 type XI collagen isoform A preproprotein [Ho... ARAP3 0.026 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... LOC388199 0.026 PREDICTED: hypothetical protein LOC388199 LOC388199 0.026 hypothetical protein LOC388199 COL9A3 0.023 alpha 3 type IX collagen WIPF1 0.023 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.023 WAS/WASL interacting protein family, member 1 IRS2 0.023 insulin receptor substrate 2 COL11A2 0.023 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 1 preproprotein ... LOC100287290 0.020 PREDICTED: hypothetical protein LOC100287290 0.020 PREDICTED: hypothetical protein XP_002342446 RADIL 0.020 Rap GTPase interactor VPS37C 0.020 vacuolar protein sorting 37C STRC 0.020 stereocilin COL28A1 0.016 collagen, type XXVIII precursor PRH1 0.016 proline-rich protein HaeIII subfamily 1 PRH2 0.016 proline-rich protein HaeIII subfamily 2 PRH2 0.016 proline-rich protein HaeIII subfamily 2 COL5A2 0.016 alpha 2 type V collagen preproprotein CREBBP 0.016 CREB binding protein isoform b CREBBP 0.016 CREB binding protein isoform a COL21A1 0.016 collagen, type XXI, alpha 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.