Guide to the Human Genome
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Name: ARAP3 Sequence: fasta or formatted (1544aa) NCBI GI: 21264337
Description:

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        109           3
 C cysteine            2.0         31           1
 D aspartate           4.5         70           2
 E glutamate           6.8        105           2
 F phenylalanine       3.6         56           2
 G glycine             8.0        123           4
 H histidine           1.9         29           1
 I isoleucine          3.0         46           2
 K lysine              3.7         57           2
 L leucine            12.0        185           4
 M methionine          1.4         22           2
 N asparagine          1.7         26           1
 P proline             9.3        143           3
 Q glutamine           5.4         83           2
 R arginine            7.3        113           2
 S serine              8.6        133           3
 T threonine           5.7         88           2
 V valine              4.9         76           3
 W tryptophan          1.6         24           1
 Y tyrosine            1.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 
ARAP2                 0.261   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP1                 0.237   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
ARAP1                 0.224   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.128   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ASAP3                 0.022   ArfGAP with SH3 domain, ankyrin repeat and PH domai...
ASAP3                 0.022   ArfGAP with SH3 domain, ankyrin repeat and PH domain...
AGAP3                 0.022   centaurin, gamma 3 isoform a 
AGAP2                 0.021   centaurin, gamma 1 isoform PIKE-S 
AGAP11                0.021   ankyrin repeat and GTPase domain Arf GTPase activat...
AGAP4                 0.021   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP2                 0.021   centaurin, gamma 1 isoform PIKE-L 
AGAP7                 0.021   ArfGAP with GTPase domain, ankyrin repeat and PH do...
MYO9B                 0.020   myosin IXB isoform 2 
MYO9B                 0.020   myosin IXB isoform 1 
SNX26                 0.020   sorting nexin 26 
AGAP8                 0.020   ArfGAP with GTPase domain, ankyrin repeat and PH do...
ARHGAP5               0.020   Rho GTPase activating protein 5 isoform a 
ARHGAP5               0.020   Rho GTPase activating protein 5 isoform b 
ACAP3                 0.020   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
AGAP6                 0.019   centaurin, gamma-like family, member 3 
ACAP2                 0.019   centaurin, beta 2 
AGAP1                 0.019   centaurin, gamma 2 isoform 2 
AGAP1                 0.019   centaurin, gamma 2 isoform 1 
AGAP5                 0.019   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.019   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.019   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
ARHGAP9               0.019   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.019   Rho GTPase activating protein 9 isoform 3 
ARHGAP30              0.019   Rho GTPase activating protein 30 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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