Guide to the Human Genome
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Name: PRH2 Sequence: fasta or formatted (166aa) NCBI GI: 158966674
Description:

proline-rich protein HaeIII subfamily 2

Referenced in:

Lacrimal and Salivary Glands

Other entries for this name:
alt mRNA [166aa] proline-rich protein HaeIII subfamily 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4          4           1
 C cysteine            0.0          0           0
 D aspartate           5.4          9           1
 E glutamate           3.0          5           2
 F phenylalanine       1.2          2           1
 G glycine            18.7         31           2
 H histidine           1.8          3           1
 I isoleucine          1.8          3           1
 K lysine              1.2          2           1
 L leucine             5.4          9           2
 M methionine          0.6          1           1
 N asparagine          1.2          2           1
 P proline            24.7         41           6
 Q glutamine          21.1         35           4
 R arginine            3.6          6           1
 S serine              5.4          9           2
 T threonine           0.0          0           0
 V valine              2.4          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline-rich protein HaeIII subfamily 2 
PRH2                  1.000   proline-rich protein HaeIII subfamily 2 
PRH1                  0.985   proline-rich protein HaeIII subfamily 1 
PRB1                  0.491   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB2                  0.491   proline-rich protein BstNI subfamily 2 
PRB3                  0.462   proline-rich protein BstNI subfamily 3 precursor [H...
PRB1                  0.424   proline-rich protein BstNI subfamily 1 isoform 2 pre...
PRB4                  0.424   proline-rich protein BstNI subfamily 4 precursor [Ho...
PRB1                  0.397   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRR4                  0.209   proline rich 4 (lacrimal) isoform 2 
CPSF6                 0.162   cleavage and polyadenylation specific factor 6, 68 ...
WBP11                 0.159   WW domain binding protein 11 
SYN1                  0.153   synapsin I isoform Ia 
SYN1                  0.153   synapsin I isoform Ib 
BRD4                  0.141   bromodomain-containing protein 4 isoform long 
WDR33                 0.141   WD repeat domain 33 isoform 1 
GRINA                 0.138   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.138   glutamate receptor, ionotropic, N-methyl D-aspartate...
PRR4                  0.135   proline rich 4 (lacrimal) isoform 1 
WASL                  0.132   Wiskott-Aldrich syndrome gene-like protein 
SF3B4                 0.132   splicing factor 3b, subunit 4 
SFPQ                  0.132   splicing factor proline/glutamine rich (polypyrimidin...
WAS                   0.132   Wiskott-Aldrich syndrome protein 
SNRPB                 0.132   small nuclear ribonucleoprotein polypeptide B/B' iso...
EMID1                 0.121   EMI domain containing 1 
SS18                  0.118   synovial sarcoma translocation, chromosome 18 isofor...
MED25                 0.118   mediator complex subunit 25 
SF1                   0.118   splicing factor 1 isoform 3 
SF1                   0.118   splicing factor 1 isoform 2 
SF1                   0.118   splicing factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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