LOC100287290 19538

Name: LOC100287290	Sequence: fasta or formatted (242aa)		NCBI GI: 239748281
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {242aa} PREDICTED: hypothetical protein XP_002342446
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 23 1 C cysteine 1.2 3 1 D aspartate 3.3 8 1 E glutamate 4.1 10 2 F phenylalanine 1.7 4 1 G glycine 13.2 32 3 H histidine 2.5 6 1 I isoleucine 2.9 7 2 K lysine 1.7 4 1 L leucine 9.9 24 2 M methionine 0.8 2 1 N asparagine 2.1 5 2 P proline 11.6 28 4 Q glutamine 5.0 12 4 R arginine 13.2 32 2 S serine 7.4 18 2 T threonine 3.3 8 1 V valine 5.0 12 2 W tryptophan 0.8 2 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100287290 1.000 PREDICTED: hypothetical protein XP_002342446 FLJ37078 0.062 hypothetical protein LOC222183 COL5A3 0.059 collagen, type V, alpha 3 preproprotein COL1A1 0.057 alpha 1 type I collagen preproprotein COL3A1 0.051 collagen type III alpha 1 preproprotein COL28A1 0.051 collagen, type XXVIII precursor FGF2 0.049 fibroblast growth factor 2 COL5A1 0.047 alpha 1 type V collagen preproprotein COL2A1 0.042 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.042 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL7A1 0.042 alpha 1 type VII collagen precursor COL4A3 0.040 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.040 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.040 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.040 alpha 3 type IV collagen isoform 1 precursor OGFR 0.040 opioid growth factor receptor SRPK3 0.040 serine arginine rich protein-specific kinase 3 [Homo... COL4A6 0.040 type IV alpha 6 collagen isoform A precursor COL4A6 0.040 type IV alpha 6 collagen isoform B precursor COL11A1 0.038 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.038 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.038 alpha 1 type XI collagen isoform A preproprotein [Ho... COL18A1 0.038 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.038 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.038 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL4A4 0.038 alpha 4 type IV collagen precursor COL1A2 0.038 alpha 2 type I collagen COL4A5 0.038 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.038 type IV collagen alpha 5 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.