Guide to the Human Genome
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Name: RADIL Sequence: fasta or formatted (1075aa) NCBI GI: 148612825
Description:

Rap GTPase interactor

Referenced in:

PDZ Domain
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4        101           3
 C cysteine            2.1         23           1
 D aspartate           4.2         45           2
 E glutamate           5.9         63           2
 F phenylalanine       3.1         33           3
 G glycine             7.3         79           2
 H histidine           2.7         29           2
 I isoleucine          2.6         28           1
 K lysine              2.7         29           2
 L leucine            14.0        151           4
 M methionine          1.8         19           1
 N asparagine          1.0         11           1
 P proline             8.8         95           3
 Q glutamine           5.8         62           2
 R arginine            6.9         74           2
 S serine              9.1         98           3
 T threonine           4.4         47           1
 V valine              4.6         49           2
 W tryptophan          1.1         12           1
 Y tyrosine            2.5         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rap GTPase interactor 
RASIP1                0.213   Ras-interacting protein 1 
MLLT4                 0.023   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.023   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PTPN13                0.021   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.021   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.021   protein tyrosine phosphatase, non-receptor type 13 is...
MAGI3                 0.021   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.021   membrane-associated guanylate kinase-related  3 iso...
MAGI2                 0.021   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.020   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.020   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.020   membrane associated guanylate kinase, WW and PDZ dom...
PTPN13                0.019   protein tyrosine phosphatase, non-receptor type 13 i...
MPDZ                  0.018   multiple PDZ domain protein 
FRMPD2                0.018   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.018   FERM and PDZ domain containing 2 isoform 3 
INADL                 0.017   InaD-like 
IL16                  0.016   interleukin 16 isoform 2 
MAGIX                 0.016   MAGI family member, X-linked isoform b 
MAGIX                 0.016   MAGI family member, X-linked isoform a 
SYNJ2BP               0.016   synaptojanin 2 binding protein 
DLG2                  0.016   chapsyn-110 isoform 3 
DLG2                  0.016   chapsyn-110 isoform 1 
DLG2                  0.016   chapsyn-110 isoform 2 
MLLT4                 0.016   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MYO5A                 0.016   myosin VA isoform 2 
MYO5A                 0.016   myosin VA isoform 1 
PPP1R9B               0.015   protein phosphatase 1, regulatory subunit 9B 
DLG3                  0.015   synapse-associated protein 102 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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