NIN 4487

Name: NIN	Sequence: fasta or formatted (2046aa)		NCBI GI: 148536871
Description: ninein isoform 1		Referenced in: Centrosome Glycogen
Other entries for this name: alt prot [2133aa] ninein isoform 2 alt prot [2096aa] ninein isoform 4 alt prot [2090aa] ninein isoform 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 95 2 C cysteine 1.7 35 2 D aspartate 4.1 83 2 E glutamate 15.8 323 3 F phenylalanine 1.8 37 2 G glycine 3.1 63 2 H histidine 3.0 61 2 I isoleucine 2.9 59 1 K lysine 7.3 150 3 L leucine 13.5 276 2 M methionine 2.4 49 2 N asparagine 4.3 88 2 P proline 2.1 43 2 Q glutamine 9.5 194 3 R arginine 5.8 118 2 S serine 7.0 143 2 T threonine 4.7 97 3 V valine 4.6 94 2 W tryptophan 0.7 15 1 Y tyrosine 1.1 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ninein isoform 1 NIN 0.990 ninein isoform 5 NIN 0.990 ninein isoform 2 NIN 0.973 ninein isoform 4 NINL 0.108 ninein-like GCC2 0.046 GRIP and coiled-coil domain-containing 2 CEP250 0.045 centrosomal protein 2 TCHH 0.045 trichohyalin GOLGA4 0.045 golgi autoantigen, golgin subfamily a, 4 GOLGB1 0.044 golgi autoantigen, golgin subfamily b, macrogolgin ... CENPE 0.043 centromere protein E PLEC1 0.038 plectin 1 isoform 11 PLEC1 0.038 plectin 1 isoform 10 PLEC1 0.038 plectin 1 isoform 8 PLEC1 0.038 plectin 1 isoform 7 PLEC1 0.038 plectin 1 isoform 6 PLEC1 0.038 plectin 1 isoform 3 PLEC1 0.038 plectin 1 isoform 2 PLEC1 0.038 plectin 1 isoform 1 TRIP11 0.036 thyroid hormone receptor interactor 11 EEA1 0.036 early endosome antigen 1, 162kD TPR 0.036 nuclear pore complex-associated protein TPR CENPF 0.035 centromere protein F NUMA1 0.034 nuclear mitotic apparatus protein 1 MYH9 0.033 myosin, heavy polypeptide 9, non-muscle MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.032 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.032 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CEP290 0.032 centrosomal protein 290kDa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.