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Search of human proteins with 21361392
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo
sapiens]
(426 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens] 879 0.0
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 808 0.0
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 793 0.0
gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi... 780 0.0
gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor ... 771 0.0
gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1 [... 754 0.0
gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b [... 743 0.0
gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [H... 741 0.0
gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo sapi... 721 0.0
gi|194328712 pregnancy specific beta-1-glycoprotein 8 isoform c ... 530 e-151
gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1... 457 e-128
gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo sapi... 456 e-128
gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2 [... 443 e-124
gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 366 e-101
gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 366 e-101
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 300 1e-81
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 299 4e-81
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 289 3e-78
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 289 3e-78
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 286 2e-77
gi|5901930 carcinoembryonic antigen-related cell adhesion molecu... 246 3e-65
gi|164663826 pregnancy specific beta-1-glycoprotein 11 isoform 2... 221 1e-57
gi|164663824 pregnancy specific beta-1-glycoprotein 11 isoform 2... 221 1e-57
gi|52317156 carcinoembryonic antigen-related cell adhesion molec... 167 1e-41
gi|148612793 carcinoembryonic antigen-related cell adhesion mole... 167 1e-41
gi|121114300 carcinoembryonic antigen-related cell adhesion mole... 160 2e-39
gi|156564378 carcinoembryonic antigen-related cell adhesion mole... 148 1e-35
gi|156564393 carcinoembryonic antigen-related cell adhesion mole... 148 1e-35
gi|71143132 carcinoembryonic antigen-related cell adhesion molec... 132 6e-31
gi|85861202 carcinoembryonic antigen-related cell adhesion molec... 126 3e-29
>gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens]
Length = 426
Score = 879 bits (2271), Expect = 0.0
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
Sbjct: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
Sbjct: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
Sbjct: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
Sbjct: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
Sbjct: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
Sbjct: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPA 420
PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPA
Sbjct: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPA 420
Query: 421 SLAIGF 426
SLAIGF
Sbjct: 421 SLAIGF 426
>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
[Homo sapiens]
Length = 426
Score = 808 bits (2086), Expect = 0.0
Identities = 394/425 (92%), Positives = 403/425 (94%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQRI WKGLLLTASLLNFWN PTTAQVTIEA+PTKVSEGKDVLLLVHNLPQ
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQ+RDLYHYITSYVVDG+IIIYGPAYSGRET YSNASLLIQNVT+EDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHII G D RGVTG FTFTL+LETPKPSISSS LNPRE MEAVSLTCDPETPDASYLW
Sbjct: 121 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLPM+H L+LSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDP TLNLLPKLP
Sbjct: 181 WMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
KPYITINNL PRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
Sbjct: 241 KPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRD+YGGIRS PVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
Sbjct: 301 TRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPA 420
PAQYSWTIN KFQL GQKLFI ITTKHSGLY CSVRNSATGKESSKSMTV+VSGK IP
Sbjct: 361 PAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSGKRIPV 420
Query: 421 SLAIG 425
SLAIG
Sbjct: 421 SLAIG 425
>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
[Homo sapiens]
Length = 419
Score = 793 bits (2048), Expect = 0.0
Identities = 386/419 (92%), Positives = 396/419 (94%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQRI WKGLLLTASLLNFWN PTTAQVTIEA+PTKVSEGKDVLLLVHNLPQ
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQ+RDLYHYITSYVVDG+IIIYGPAYSGRET YSNASLLIQNVT+EDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHII G D RGVTG FTFTL+LETPKPSISSS LNPRE MEAVSLTCDPETPDASYLW
Sbjct: 121 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLPM+H L+LSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDP TLNLLPKLP
Sbjct: 181 WMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
KPYITINNL PRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
Sbjct: 241 KPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRD+YGGIRS PVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
Sbjct: 301 TRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIP 419
PAQYSWTIN KFQL GQKLFI ITTKHSGLY CSVRNSATGKESSKSMTV+VS +P
Sbjct: 361 PAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSDWTLP 419
>gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo
sapiens]
Length = 428
Score = 780 bits (2013), Expect = 0.0
Identities = 379/414 (91%), Positives = 389/414 (93%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQRI WKGLLLTA LLNFWNLPTTAQVTIEAEPTKVS+GKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQRITWKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL GYIWYKGQM+DLYHYITSYVVDG+IIIYGPAYSGRET YSNASLLIQNVTREDAGSY
Sbjct: 61 NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHI+K DGTRG TG FTFTL+LETPKPSISSSNL PRE MEAVSLTCDPETPDASYLW
Sbjct: 121 TLHIVKRGDGTRGETGHFTFTLYLETPKPSISSSNLYPREDMEAVSLTCDPETPDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLPMTHSL+LS+ RTLFL GVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
Sbjct: 181 WMNGQSLPMTHSLQLSKNKRTLFLFGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
KPYITINNLNPRENKDVL FTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
Sbjct: 241 KPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEI+DRYGGIRS PVTLNVLYGPDLPRIYPSFTYY SGE LYLSC ADSNP
Sbjct: 301 TRNETGPYQCEIQDRYGGIRSYPVTLNVLYGPDLPRIYPSFTYYHSGENLYLSCFADSNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
PA+YSWTIN KFQL GQKLFI ITTKHSGLY CSVRNSATG ESSKSMTV+VS
Sbjct: 361 PAEYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGMESSKSMTVKVS 414
>gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor
[Homo sapiens]
Length = 419
Score = 771 bits (1990), Expect = 0.0
Identities = 374/419 (89%), Positives = 386/419 (92%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQ I WKGLLLTASLLNFWN PTTAQVTIEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQ+RDLYHY+TSY+VDG+II YGPAYSGRET YSNASLLIQNVT+ED GSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYVTSYIVDGQIIKYGPAYSGRETVYSNASLLIQNVTQEDTGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGT GVTGRFTFTL+LETPKPSISSSN NPRE EAV LTCDPETPDASYLW
Sbjct: 121 TLHIIKRGDGTGGVTGRFTFTLYLETPKPSISSSNFNPREATEAVILTCDPETPDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLPMTHSL+LSETNRTL+L GVT YTAGPYECEIRNPVSASRSDPVTLNLLPKLP
Sbjct: 181 WMNGQSLPMTHSLQLSETNRTLYLFGVTNYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
KPYITINNLNPRENKDV FTCEPKSENYTYIWWLNGQSLPVSPRVKR IENRILILPSV
Sbjct: 241 KPYITINNLNPRENKDVSTFTCEPKSENYTYIWWLNGQSLPVSPRVKRRIENRILILPSV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYY SG+ LYLSC ADSNP
Sbjct: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYHSGQNLYLSCFADSNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIP 419
PAQYSWTIN KFQL GQKL I ITTKHSGLY CSVRNSATGKESSKS+TV VS +P
Sbjct: 361 PAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSVTVRVSDWTLP 419
>gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1
[Homo sapiens]
Length = 419
Score = 754 bits (1946), Expect = 0.0
Identities = 370/418 (88%), Positives = 382/418 (91%), Gaps = 1/418 (0%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQRI WKG+LLTASLLNFWN PTTAQVTIEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL GYIWYKGQM LYHYITSYVVDG+ IIYGPAYSGRE YSNASLLIQNVT+EDAGSY
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGT GVTG FTFTLHLETPKPSISSSNLNPRE MEAV LTCDP TP ASY W
Sbjct: 121 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLPMTH L+LS+TNRTLF+ GVTKY AGPYECEIRNPVSASRSDPVTLNLLPKL
Sbjct: 181 WMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLS 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
KPYITINNLNPRENKDVL FTCEPKS+NYTYIWWLNGQSLPVSPRVKRPIENRILILP+V
Sbjct: 241 KPYITINNLNPRENKDVLTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLP IYPSFTYYRSGE LYLSC A+SNP
Sbjct: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWI 418
AQYSWTIN KFQL GQKL I ITTKHSGLY CSVRNSATGKESSKS+TV+VS WI
Sbjct: 361 RAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVS-DWI 417
>gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b
[Homo sapiens]
Length = 424
Score = 743 bits (1919), Expect = 0.0
Identities = 366/415 (88%), Positives = 378/415 (91%), Gaps = 1/415 (0%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQ I WKGLLLTASLLNFWNLPTTAQV IEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQM DLYHYITSYVV G+II YGPAYSGRET YSNASLLIQNVT+EDAGSY
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVVHGQII-YGPAYSGRETVYSNASLLIQNVTQEDAGSY 119
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGT GVTG FT TL+ ETPKPSISSSNLNPRE MEAV L CDPETPDASYLW
Sbjct: 120 TLHIIKRGDGTGGVTGYFTVTLYSETPKPSISSSNLNPREVMEAVRLICDPETPDASYLW 179
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
+NGQ+LPMTH L+LS+TNRTL+L GVTKY AGPYECEIRNPVSASRSDPVTLNLLPKLP
Sbjct: 180 LLNGQNLPMTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLP 239
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
PYITINNLNPRE KDVL FTCEPKS NYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
Sbjct: 240 MPYITINNLNPREKKDVLAFTCEPKSRNYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 299
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRDRYGGIRS+PVTLNVLYGPDLPRIYPSFTYYRSGE L LSC ADSNP
Sbjct: 300 TRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLDLSCFADSNP 359
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSG 415
PA+YSWTIN KFQL GQKLFI ITT HSGLY CSVRNSATGKE SKSM V+VSG
Sbjct: 360 PAEYSWTINGKFQLSGQKLFIPQITTNHSGLYACSVRNSATGKEISKSMIVKVSG 414
>gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [Homo
sapiens]
Length = 435
Score = 741 bits (1913), Expect = 0.0
Identities = 365/414 (88%), Positives = 377/414 (91%), Gaps = 1/414 (0%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQ I WKGLLLTASLLNFWNLPTTAQV IEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQM DLYHYITSYVV G+II YGPAYSGRET YSNASLLIQNVT+EDAGSY
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVVHGQII-YGPAYSGRETVYSNASLLIQNVTQEDAGSY 119
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGT GVTG FT TL+ ETPKPSISSSNLNPRE MEAV L CDPETPDASYLW
Sbjct: 120 TLHIIKRGDGTGGVTGYFTVTLYSETPKPSISSSNLNPREVMEAVRLICDPETPDASYLW 179
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
+NGQ+LPMTH L+LS+TNRTL+L GVTKY AGPYECEIRNPVSASRSDPVTLNLLPKLP
Sbjct: 180 LLNGQNLPMTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLP 239
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
PYITINNLNPRE KDVL FTCEPKS NYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
Sbjct: 240 MPYITINNLNPREKKDVLAFTCEPKSRNYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 299
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRDRYGGIRS+PVTLNVLYGPDLPRIYPSFTYYRSGE L LSC ADSNP
Sbjct: 300 TRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLDLSCFADSNP 359
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
PA+YSWTIN KFQL GQKLFI ITT HSGLY CSVRNSATGKE SKSM V+VS
Sbjct: 360 PAEYSWTINGKFQLSGQKLFIPQITTNHSGLYACSVRNSATGKEISKSMIVKVS 413
Score = 38.1 bits (87), Expect = 0.015
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 13/143 (9%)
Query: 104 NASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETME 163
N L++ +VTR + G Y I G R + P+ S + E ++
Sbjct: 291 NRILILPSVTRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLD 350
Query: 164 AVSLTCDPET-PDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNP 222
L+C ++ P A Y W +NG K + + LF+ +T +G Y C +RN
Sbjct: 351 ---LSCFADSNPPAEYSWTING---------KFQLSGQKLFIPQITTNHSGLYACSVRNS 398
Query: 223 VSASRSDPVTLNLLPKLPKPYIT 245
+ + + + P +T
Sbjct: 399 ATGKEISKSMIVKVSETASPQVT 421
>gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo
sapiens]
Length = 426
Score = 721 bits (1861), Expect = 0.0
Identities = 352/415 (84%), Positives = 369/415 (88%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG L AP CTQRI WKGLLLTASLLNFWN PTTA+VTIEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL GY WYKG+M DLYHYI SY+VDG+IIIYGPAYSGRET YSNASLLIQNVTR+DAG+Y
Sbjct: 61 NLPGYFWYKGEMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGTY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK D TR FTFTL+LETPKP ISSSNLNPRE MEAV L CDPET DASYLW
Sbjct: 121 TLHIIKRGDETREEIRHFTFTLYLETPKPYISSSNLNPREAMEAVRLICDPETLDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
WMNGQSLP+TH L+LS+TNRTL+L GVTKY AGPYECEIRNPVSASRSDPVTLNLLPKLP
Sbjct: 181 WMNGQSLPVTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV 300
PYITINNLNPRENKDVL FTCEPKSENYTYIWWLNGQSLPVSP VKRPIENRILILPSV
Sbjct: 241 IPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPGVKRPIENRILILPSV 300
Query: 301 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP 360
TRNETGPYQCEIRDRYGG+RS+PV LNVLYGPDLPRIYPSFTYYRSGE L LSC +SNP
Sbjct: 301 TRNETGPYQCEIRDRYGGLRSNPVILNVLYGPDLPRIYPSFTYYRSGENLDLSCFTESNP 360
Query: 361 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSG 415
PA+Y WTIN KFQ GQKLFI IT HSGLY CSV NSATGKE SKSMTV+VSG
Sbjct: 361 PAEYFWTINGKFQQSGQKLFIPQITRNHSGLYACSVHNSATGKEISKSMTVKVSG 415
>gi|194328712 pregnancy specific beta-1-glycoprotein 8 isoform c
[Homo sapiens]
Length = 297
Score = 530 bits (1366), Expect = e-151
Identities = 257/278 (92%), Positives = 263/278 (94%)
Query: 142 LHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRT 201
L +ETPKPSISSS LNPRE MEAVSLTCDPETPDASYLWWMNGQSLPM+H L+LSETNRT
Sbjct: 20 LTVETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWMNGQSLPMSHRLQLSETNRT 79
Query: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVLNFT 261
LFLLGVTKYTAGPYECEIRNPVSASRSDP TLNLLPKLPKPYITINNL PRENKDVLNFT
Sbjct: 80 LFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLPKPYITINNLKPRENKDVLNFT 139
Query: 262 CEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRS 321
CEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRD+YGGIRS
Sbjct: 140 CEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDQYGGIRS 199
Query: 322 DPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQKLFI 381
PVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTIN KFQL GQKLFI
Sbjct: 200 YPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINGKFQLSGQKLFI 259
Query: 382 RHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIP 419
ITTKHSGLY CSVRNSATGKESSKSMTV+VS +P
Sbjct: 260 PQITTKHSGLYACSVRNSATGKESSKSMTVKVSDWTLP 297
Score = 158 bits (399), Expect = 1e-38
Identities = 106/325 (32%), Positives = 155/325 (47%), Gaps = 46/325 (14%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQRI WKGLLLT T + +I + E + + L +
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTVE---------TPKPSISSSKLNPREAMEAVSLTCDPET 51
Query: 61 NLTGYIWY-KGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGS 119
Y+W+ GQ + H + + + +N +L + VT+ AG
Sbjct: 52 PDASYLWWMNGQSLPMSHRL-------------------QLSETNRTLFLLGVTKYTAGP 92
Query: 120 YTLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYL 179
Y I +R + FT L + PKP I+ +NL PRE + ++ TC+P++ + +Y+
Sbjct: 93 YECEIRNPVSASR--SDPFTLNLLPKLPKPYITINNLKPRENKDVLNFTCEPKSENYTYI 150
Query: 180 WWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--P 237
WW+NGQSLP++ +K NR L L VT+ GPY+CEIR+ RS PVTLN+L P
Sbjct: 151 WWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDQYGGIRSYPVTLNVLYGP 210
Query: 238 KLPKPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILI 296
LP+ Y + E VL +C S Y W +NG K + + L
Sbjct: 211 DLPRIYPSFTYYRSGE---VLYLSCSADSNPPAQYSWTING---------KFQLSGQKLF 258
Query: 297 LPSVTRNETGPYQCEIRDRYGGIRS 321
+P +T +G Y C +R+ G S
Sbjct: 259 IPQITTKHSGLYACSVRNSATGKES 283
Score = 114 bits (284), Expect = 2e-25
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 15/185 (8%)
Query: 233 LNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
L L + PKP I+ + LNPRE + ++ TC+P++ + +Y+WW+NGQSLP+S R++ N
Sbjct: 18 LLLTVETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWMNGQSLPMSHRLQLSETN 77
Query: 293 RILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGE---V 349
R L L VT+ GPY+CEIR+ RSDP TLN+L P LP+ Y + + E V
Sbjct: 78 RTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLL--PKLPKPYITINNLKPRENKDV 135
Query: 350 LYLSCSADSNPPAQYSWTIN---------EKFQLPGQKLFIRHITTKHSGLYVCSVRNSA 400
L +C S Y W +N K + + L + +T +G Y C +R+
Sbjct: 136 LNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDQY 194
Query: 401 TGKES 405
G S
Sbjct: 195 GGIRS 199
>gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1
[Homo sapiens]
Length = 335
Score = 457 bits (1175), Expect = e-128
Identities = 237/338 (70%), Positives = 262/338 (77%), Gaps = 16/338 (4%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCT+ IKWKGLLLTA LLNFWNLPTTAQV IEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTALLLNFWNLPTTAQVMIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQ+RDLYHYITSYVVDG+IIIYGPAYSGRET YSNASLLIQNVTREDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGTRGVTG FTFTL+LETPKPSISSSNLNPRE ME V LTC+PETPDASYLW
Sbjct: 121 TLHIIKRGDGTRGVTGYFTFTLYLETPKPSISSSNLNPREAMETVILTCNPETPDASYLW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PK 238
WMNGQSLPMTH ++LSETNRTLFL GVTKYTAGPYECEI N SASRSDPVTLNLL P
Sbjct: 181 WMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPD 240
Query: 239 LPKPYITINNLNPRENKDVLNF-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILIL 297
LP+ + ++ + EN D+ F P ++ Y W +NG K + + L +
Sbjct: 241 LPRIFPSVTSYYSGENLDLSCFANSNPPAQ---YSWTING---------KFQLSGQKLFI 288
Query: 298 PSVTRNETGPYQCEIRDRYGGIRSD-PVTLNVLYGPDL 334
P +T G Y C R+ G S +T+ V+ P L
Sbjct: 289 PQITPKHNGLYACSARNSATGEESSTSLTIRVIAPPGL 326
Score = 229 bits (584), Expect = 4e-60
Identities = 117/218 (53%), Positives = 149/218 (68%), Gaps = 2/218 (0%)
Query: 198 TNRTLFLLGVTKYTAGPYECEIRNPVSASR--SDPVTLNLLPKLPKPYITINNLNPRENK 255
+N +L + VT+ AG Y I +R + T L + PKP I+ +NLNPRE
Sbjct: 103 SNASLLIQNVTREDAGSYTLHIIKRGDGTRGVTGYFTFTLYLETPKPSISSSNLNPREAM 162
Query: 256 DVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315
+ + TC P++ + +Y+WW+NGQSLP++ R++ NR L L VT+ GPY+CEI +
Sbjct: 163 ETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNS 222
Query: 316 YGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLP 375
RSDPVTLN+L+GPDLPRI+PS T Y SGE L LSC A+SNPPAQYSWTIN KFQL
Sbjct: 223 GSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLS 282
Query: 376 GQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEV 413
GQKLFI IT KH+GLY CS RNSATG+ESS S+T+ V
Sbjct: 283 GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 320
>gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo
sapiens]
Length = 335
Score = 456 bits (1174), Expect = e-128
Identities = 235/324 (72%), Positives = 254/324 (78%), Gaps = 15/324 (4%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCT+ IKWKGLL+TASLLNFWNLPTTAQVTIEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTEHIKWKGLLVTASLLNFWNLPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NLTGYIWYKGQ+RDLYHYITSYVVDG+IIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGTRGVTG FTFTL+LETPKPSISSSNLNPRE ME V LTCDPETPD SY W
Sbjct: 121 TLHIIKRGDGTRGVTGYFTFTLYLETPKPSISSSNLNPREAMETVILTCDPETPDTSYQW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PK 238
WMNGQSLPMTH +LSETNRTLFL GVTKYTAGPYECEIRN SASRSDPVTLNLL P
Sbjct: 181 WMNGQSLPMTHRFQLSETNRTLFLFGVTKYTAGPYECEIRNSGSASRSDPVTLNLLHGPD 240
Query: 239 LPKPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILIL 297
LP+ + + N +N L +C S Y W +NG K + L +
Sbjct: 241 LPRIHPSYTNYRSGDN---LYLSCFANSNPPAQYSWTING---------KFQQSGQNLFI 288
Query: 298 PSVTRNETGPYQCEIRDRYGGIRS 321
P +T +G Y C +R+ G S
Sbjct: 289 PQITTKHSGLYVCSVRNSATGEES 312
Score = 241 bits (616), Expect = 7e-64
Identities = 123/219 (56%), Positives = 155/219 (70%), Gaps = 2/219 (0%)
Query: 198 TNRTLFLLGVTKYTAGPYECEIRNPVSASR--SDPVTLNLLPKLPKPYITINNLNPRENK 255
+N +L + VT+ AG Y I +R + T L + PKP I+ +NLNPRE
Sbjct: 103 SNASLLIQNVTREDAGSYTLHIIKRGDGTRGVTGYFTFTLYLETPKPSISSSNLNPREAM 162
Query: 256 DVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315
+ + TC+P++ + +Y WW+NGQSLP++ R + NR L L VT+ GPY+CEIR+
Sbjct: 163 ETVILTCDPETPDTSYQWWMNGQSLPMTHRFQLSETNRTLFLFGVTKYTAGPYECEIRNS 222
Query: 316 YGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLP 375
RSDPVTLN+L+GPDLPRI+PS+T YRSG+ LYLSC A+SNPPAQYSWTIN KFQ
Sbjct: 223 GSASRSDPVTLNLLHGPDLPRIHPSYTNYRSGDNLYLSCFANSNPPAQYSWTINGKFQQS 282
Query: 376 GQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
GQ LFI ITTKHSGLYVCSVRNSATG+ESS S+TV+VS
Sbjct: 283 GQNLFIPQITTKHSGLYVCSVRNSATGEESSTSLTVKVS 321
>gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2
[Homo sapiens]
Length = 326
Score = 443 bits (1139), Expect = e-124
Identities = 230/324 (70%), Positives = 248/324 (76%), Gaps = 15/324 (4%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQRI WKG+LLTASLLNFWN PTTAQVTIEA+P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL GYIWYKGQM LYHYITSYVVDG+ IIYGPAYSGRE YSNASLLIQNVT+EDAGSY
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK DGT GVTG FTFTLHLETPKPSISSSNLNPRE MEAV LTCDP TP ASY W
Sbjct: 121 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PK 238
WMNGQSLPMTH L+LS+TNRTLF+ GVTKY AGPYECEIRNPVSASRSDPVTLNLL P
Sbjct: 181 WMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLHGPD 240
Query: 239 LPKPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILIL 297
LP Y + EN L +C +S Y W +NG K + + L +
Sbjct: 241 LPSIYPSFTYYRSGEN---LYLSCFAESNPRAQYSWTING---------KFQLSGQKLSI 288
Query: 298 PSVTRNETGPYQCEIRDRYGGIRS 321
P +T +G Y C +R+ G S
Sbjct: 289 PQITTKHSGLYACSVRNSATGKES 312
Score = 245 bits (625), Expect = 6e-65
Identities = 128/223 (57%), Positives = 156/223 (69%), Gaps = 3/223 (1%)
Query: 198 TNRTLFLLGVTKYTAGPYECEI--RNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENK 255
+N +L + VT+ AG Y I R + + T L + PKP I+ +NLNPRE
Sbjct: 103 SNASLLIQNVTQEDAGSYTLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAM 162
Query: 256 DVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315
+ + TC+P + +Y WW+NGQSLP++ R++ NR L + VT+ GPY+CEIR+
Sbjct: 163 EAVILTCDPATPAASYQWWMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNP 222
Query: 316 YGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLP 375
RSDPVTLN+L+GPDLP IYPSFTYYRSGE LYLSC A+SNP AQYSWTIN KFQL
Sbjct: 223 VSASRSDPVTLNLLHGPDLPSIYPSFTYYRSGENLYLSCFAESNPRAQYSWTINGKFQLS 282
Query: 376 GQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWI 418
GQKL I ITTKHSGLY CSVRNSATGKESSKS+TV+VS WI
Sbjct: 283 GQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVS-DWI 324
>gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 366 bits (940), Expect = e-101
Identities = 192/324 (59%), Positives = 224/324 (69%), Gaps = 15/324 (4%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQ I WKGLLLTASLLNFWNLP TAQVTIEA P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL GYIWYKGQ+ DLYHYITSYVVDG+I IYGPAY+GRET YSNASLLIQNVTREDAGSY
Sbjct: 61 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK D TRGVTG FTF L+L+ PKP I+ +N PRE + ++ TC+P++ + +Y+W
Sbjct: 121 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PK 238
W+NGQSLP++ +K NR L L VT+ GPYECEIR+ RSDPVTLN+L P
Sbjct: 181 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPD 240
Query: 239 LPKPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILIL 297
LP Y + EN L +C +S Y W +NG K + L +
Sbjct: 241 LPSIYPSFTYYRSGEN---LYLSCFAESNPPAEYFWTING---------KFQQSGQKLSI 288
Query: 298 PSVTRNETGPYQCEIRDRYGGIRS 321
P +T G Y C +R+ G S
Sbjct: 289 PQITTKHRGLYTCSVRNSATGKES 312
Score = 336 bits (861), Expect = 3e-92
Identities = 169/219 (77%), Positives = 179/219 (81%), Gaps = 2/219 (0%)
Query: 198 TNRTLFLLGVTKYTAGPYECEI--RNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENK 255
+N +L + VT+ AG Y I R + + T NL KLPKPYITINN PRENK
Sbjct: 103 SNASLLIQNVTREDAGSYTLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENK 162
Query: 256 DVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315
DVL FTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPY+CEIRDR
Sbjct: 163 DVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDR 222
Query: 316 YGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLP 375
GG+RSDPVTLNVLYGPDLP IYPSFTYYRSGE LYLSC A+SNPPA+Y WTIN KFQ
Sbjct: 223 DGGMRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQS 282
Query: 376 GQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
GQKL I ITTKH GLY CSVRNSATGKESSKSMTVEVS
Sbjct: 283 GQKLSIPQITTKHRGLYTCSVRNSATGKESSKSMTVEVS 321
>gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 366 bits (940), Expect = e-101
Identities = 192/324 (59%), Positives = 224/324 (69%), Gaps = 15/324 (4%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCTQ I WKGLLLTASLLNFWNLP TAQVTIEA P KVSEGKDVLLLVHNLPQ
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL GYIWYKGQ+ DLYHYITSYVVDG+I IYGPAY+GRET YSNASLLIQNVTREDAGSY
Sbjct: 61 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLHIIK D TRGVTG FTF L+L+ PKP I+ +N PRE + ++ TC+P++ + +Y+W
Sbjct: 121 TLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIW 180
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PK 238
W+NGQSLP++ +K NR L L VT+ GPYECEIR+ RSDPVTLN+L P
Sbjct: 181 WLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPD 240
Query: 239 LPKPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILIL 297
LP Y + EN L +C +S Y W +NG K + L +
Sbjct: 241 LPSIYPSFTYYRSGEN---LYLSCFAESNPPAEYFWTING---------KFQQSGQKLSI 288
Query: 298 PSVTRNETGPYQCEIRDRYGGIRS 321
P +T G Y C +R+ G S
Sbjct: 289 PQITTKHRGLYTCSVRNSATGKES 312
Score = 336 bits (861), Expect = 3e-92
Identities = 169/219 (77%), Positives = 179/219 (81%), Gaps = 2/219 (0%)
Query: 198 TNRTLFLLGVTKYTAGPYECEI--RNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENK 255
+N +L + VT+ AG Y I R + + T NL KLPKPYITINN PRENK
Sbjct: 103 SNASLLIQNVTREDAGSYTLHIIKRGDRTRGVTGYFTFNLYLKLPKPYITINNSKPRENK 162
Query: 256 DVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315
DVL FTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPY+CEIRDR
Sbjct: 163 DVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDR 222
Query: 316 YGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLP 375
GG+RSDPVTLNVLYGPDLP IYPSFTYYRSGE LYLSC A+SNPPA+Y WTIN KFQ
Sbjct: 223 DGGMRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNPPAEYFWTINGKFQQS 282
Query: 376 GQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
GQKL I ITTKH GLY CSVRNSATGKESSKSMTVEVS
Sbjct: 283 GQKLSIPQITTKHRGLYTCSVRNSATGKESSKSMTVEVS 321
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 300 bits (769), Expect = 1e-81
Identities = 161/311 (51%), Positives = 206/311 (66%), Gaps = 13/311 (4%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG +SAP C RI W+GLLLTASL FWN PTTAQ+TIEA P+ +EGK+VLLLVHNLPQ
Sbjct: 1 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
+ GY WYKG+ D I YV+ + I GPAYS RET Y NASLL++NVTR D GSY
Sbjct: 61 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TL +IK + + VTG+ F++H ETPKPSISS+N NP E +AV+ TC+PET + +YLW
Sbjct: 121 TLQVIKLNLMSEEVTGQ--FSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLW 178
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
W+NGQSLP++ L+LS NRTL LL VT+ GPYECEI+NP SA+ SDPVTLN+L
Sbjct: 179 WVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPD 238
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSENYT-YIWWLNGQSLPVSPRVKRPIENRILILPS 299
P I+ ++ + LN +C S + Y W +NG + + L +P+
Sbjct: 239 APTISPSDTYYHAGVN-LNLSCHAASNPPSQYSWSVNGTFQQYTQK---------LFIPN 288
Query: 300 VTRNETGPYQC 310
+T +G Y C
Sbjct: 289 ITTKNSGSYAC 299
Score = 221 bits (562), Expect = 1e-57
Identities = 112/223 (50%), Positives = 144/223 (64%)
Query: 199 NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVL 258
N +L + VT+ G Y ++ S ++ P+ PKP I+ NN NP E+KD +
Sbjct: 104 NASLLMRNVTRNDTGSYTLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAV 163
Query: 259 NFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
FTCEP+++N TY+WW+NGQSLPVSPR++ NR L L SVTRN+ GPY+CEI++
Sbjct: 164 AFTCEPETQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASA 223
Query: 319 IRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQK 378
SDPVTLNVLYGPD P I PS TYY +G L LSC A SNPP+QYSW++N FQ QK
Sbjct: 224 NFSDPVTLNVLYGPDAPTISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQK 283
Query: 379 LFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPAS 421
LFI +ITTK+SG Y C NSATG+ + + VS + S
Sbjct: 284 LFIPNITTKNSGSYACHTTNSATGRNRTTVRMITVSDALVQGS 326
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 299 bits (765), Expect = 4e-81
Identities = 162/332 (48%), Positives = 208/332 (62%), Gaps = 13/332 (3%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG SAPPC + WK +LLTASLL FWN PTTA++TIE+ P V+EGK+VLLL HNLPQ
Sbjct: 1 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
N GY WYKG+ D I YV+ + GPAYSGRET Y NASLLIQNVT+ D G Y
Sbjct: 61 NRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TL +IK D TG+ F ++ E PKPSISS+N NP E +AV+ TC+PE + +YLW
Sbjct: 121 TLQVIKSDLVNEEATGQ--FHVYPELPKPSISSNNSNPVEDKDAVAFTCEPEVQNTTYLW 178
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
W+NGQSLP++ L+LS N TL LL V + AG YECEI+NP SA+RSDPVTLN+L
Sbjct: 179 WVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNVLYGPD 238
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILILPS 299
P I+ + N R ++ LN +C S Y W++NG + L +P+
Sbjct: 239 GPTISPSKANYRPGEN-LNLSCHAASNPPAQYSWFINGTFQQ---------STQELFIPN 288
Query: 300 VTRNETGPYQCEIRDRYGGIRSDPVTLNVLYG 331
+T N +G Y C+ + G+ VT+ + G
Sbjct: 289 ITVNNSGSYMCQAHNSATGLNRTTVTMITVSG 320
Score = 213 bits (542), Expect = 3e-55
Identities = 122/288 (42%), Positives = 161/288 (55%), Gaps = 18/288 (6%)
Query: 146 TPKPSISSSNLNPRETMEAVSLTCDPETPDASYLWW----MNGQSLPMTHSLKLSET--- 198
T K +I S+ N E E + L + Y W+ ++G SL + + + +
Sbjct: 33 TAKLTIESTPFNVAEGKEVLLLAHNLPQNRIGYSWYKGERVDGNSLIVGYVIGTQQATPG 92
Query: 199 -----------NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITIN 247
N +L + VT+ G Y ++ + ++ P+LPKP I+ N
Sbjct: 93 PAYSGRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSN 152
Query: 248 NLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGP 307
N NP E+KD + FTCEP+ +N TY+WW+NGQSLPVSPR++ N L L SV RN+ G
Sbjct: 153 NSNPVEDKDAVAFTCEPEVQNTTYLWWVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGS 212
Query: 308 YQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWT 367
Y+CEI++ RSDPVTLNVLYGPD P I PS YR GE L LSC A SNPPAQYSW
Sbjct: 213 YECEIQNPASANRSDPVTLNVLYGPDGPTISPSKANYRPGENLNLSCHAASNPPAQYSWF 272
Query: 368 INEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSG 415
IN FQ Q+LFI +IT +SG Y+C NSATG + + VSG
Sbjct: 273 INGTFQQSTQELFIPNITVNNSGSYMCQAHNSATGLNRTTVTMITVSG 320
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 289 bits (740), Expect = 3e-78
Identities = 181/425 (42%), Positives = 239/425 (56%), Gaps = 30/425 (7%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAP R+ W+GLLLTASLL FWN PTTAQ+T E+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
L GY WYKG+ D I Y + + GPA SGRET Y NASLLIQNVT+ D G Y
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TL +IK D TG+ F ++ E PKPSISS+N NP E +AV+ TC+PET D +YLW
Sbjct: 121 TLQVIKSDLVNEEATGQ--FHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLW 178
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
W+N QSLP++ L+LS NRTL LL VT+ GPYECEI+NPVSA+RSDPVTLN+
Sbjct: 179 WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPD 238
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILILPS 299
P I+ ++ R + L+ +C S Y W +NG + L +P+
Sbjct: 239 TPTISPSDTYYRPGAN-LSLSCYAASNPPAQYSWLINGTFQQ---------STQELFIPN 288
Query: 300 VTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDL------PRIYPSFTYYRSG-EVLYL 352
+T N +G Y C + G + T+ + +L P+I S T + + L
Sbjct: 289 ITVNNSGSYTCHANNSVTG--CNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNL 346
Query: 353 SCSADSNPPA------QYSWTINEKFQLP--GQKLFIRHITTKHSGLYVCSVRNSATGKE 404
+CS + + S +E+ +L L I + + +G Y C V N + +
Sbjct: 347 TCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQ 406
Query: 405 SSKSM 409
S M
Sbjct: 407 SDPIM 411
Score = 216 bits (549), Expect = 4e-56
Identities = 109/216 (50%), Positives = 139/216 (64%)
Query: 199 NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVL 258
N +L + VT+ G Y ++ + ++ P+LPKP I+ NN NP E+KD +
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAV 163
Query: 259 NFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
FTCEP++++ TY+WW+N QSLPVSPR++ NR L L SVTRN+TGPY+CEI++
Sbjct: 164 AFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSA 223
Query: 319 IRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQK 378
RSDPVTLNV YGPD P I PS TYYR G L LSC A SNPPAQYSW IN FQ Q+
Sbjct: 224 NRSDPVTLNVTYGPDTPTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQE 283
Query: 379 LFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
LFI +IT +SG Y C NS TG + T+ V+
Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVT 319
Score = 84.3 bits (207), Expect = 2e-16
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 103 SNASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLE--TPKPSISSSNLNPRE 160
S L I N+T ++GSYT H G T + L KP I +S
Sbjct: 280 STQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTG 339
Query: 161 TMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIR 220
++V+LTC S W+ QSLP + +KLS+ N TL + V + AG Y CE+
Sbjct: 340 DKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVF 399
Query: 221 NPVSASRSDPVTLNL 235
NP+S ++SDP+ LN+
Sbjct: 400 NPISKNQSDPIMLNV 414
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 289 bits (740), Expect = 3e-78
Identities = 181/425 (42%), Positives = 239/425 (56%), Gaps = 30/425 (7%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAP R+ W+GLLLTASLL FWN PTTAQ+T E+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
L GY WYKG+ D I Y + + GPA SGRET Y NASLLIQNVT+ D G Y
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TL +IK D TG+ F ++ E PKPSISS+N NP E +AV+ TC+PET D +YLW
Sbjct: 121 TLQVIKSDLVNEEATGQ--FHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLW 178
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
W+N QSLP++ L+LS NRTL LL VT+ GPYECEI+NPVSA+RSDPVTLN+
Sbjct: 179 WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPD 238
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILILPS 299
P I+ ++ R + L+ +C S Y W +NG + L +P+
Sbjct: 239 TPTISPSDTYYRPGAN-LSLSCYAASNPPAQYSWLINGTFQQ---------STQELFIPN 288
Query: 300 VTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDL------PRIYPSFTYYRSG-EVLYL 352
+T N +G Y C + G + T+ + +L P+I S T + + L
Sbjct: 289 ITVNNSGSYTCHANNSVTG--CNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNL 346
Query: 353 SCSADSNPPA------QYSWTINEKFQLP--GQKLFIRHITTKHSGLYVCSVRNSATGKE 404
+CS + + S +E+ +L L I + + +G Y C V N + +
Sbjct: 347 TCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQ 406
Query: 405 SSKSM 409
S M
Sbjct: 407 SDPIM 411
Score = 216 bits (549), Expect = 4e-56
Identities = 109/216 (50%), Positives = 139/216 (64%)
Query: 199 NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVL 258
N +L + VT+ G Y ++ + ++ P+LPKP I+ NN NP E+KD +
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAV 163
Query: 259 NFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
FTCEP++++ TY+WW+N QSLPVSPR++ NR L L SVTRN+TGPY+CEI++
Sbjct: 164 AFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSA 223
Query: 319 IRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQK 378
RSDPVTLNV YGPD P I PS TYYR G L LSC A SNPPAQYSW IN FQ Q+
Sbjct: 224 NRSDPVTLNVTYGPDTPTISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQE 283
Query: 379 LFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVS 414
LFI +IT +SG Y C NS TG + T+ V+
Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVT 319
Score = 84.3 bits (207), Expect = 2e-16
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 103 SNASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLE--TPKPSISSSNLNPRE 160
S L I N+T ++GSYT H G T + L KP I +S
Sbjct: 280 STQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTG 339
Query: 161 TMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIR 220
++V+LTC S W+ QSLP + +KLS+ N TL + V + AG Y CE+
Sbjct: 340 DKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVF 399
Query: 221 NPVSASRSDPVTLNL 235
NP+S ++SDP+ LN+
Sbjct: 400 NPISKNQSDPIMLNV 414
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 286 bits (732), Expect = 2e-77
Identities = 170/409 (41%), Positives = 229/409 (55%), Gaps = 23/409 (5%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
M + SAPP I W+ LLLTASLL FWN PTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MESPSAPPHRWCIPWQRLLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
+L GY WYKG+ D I YV+ + GPAYSGRE Y NASLLIQN+ + D G Y
Sbjct: 61 HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDTGFY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
TLH+IK D TG+ F ++ E PKPSISS+N P E +AV+ TC+PET DA+YLW
Sbjct: 121 TLHVIKSDLVNEEATGQ--FRVYPELPKPSISSNNSKPVEDKDAVAFTCEPETQDATYLW 178
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP 240
W+N QSLP++ L+LS NRTL L VT+ Y+CE +NPVSA RSD V LN+L
Sbjct: 179 WVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPD 238
Query: 241 KPYITINNLNPRENKDVLNFTCEPKSE-NYTYIWWLNGQSLPVSPRVKRPIENRILILPS 299
P I+ N + R ++ LN +C S Y W++NG + L +P+
Sbjct: 239 APTISPLNTSYRSGEN-LNLSCHAASNPPAQYSWFVNGTFQQ---------STQELFIPN 288
Query: 300 VTRNETGPYQCEIRDRYGGIRSDPVTLNVLYG-PDLPRIYPSFTY-YRSGEVLYLSCSAD 357
+T N +G Y C+ + G+ VT +Y P P I + + + + L+C +
Sbjct: 289 ITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPE 348
Query: 358 SNPPAQYSWTINEKFQL--------PGQKLFIRHITTKHSGLYVCSVRN 398
W N+ + + L + +T G Y C ++N
Sbjct: 349 IQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQN 397
Score = 237 bits (604), Expect = 2e-62
Identities = 132/315 (41%), Positives = 181/315 (57%), Gaps = 14/315 (4%)
Query: 104 NASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETME 163
N +L + NVTR D SY R + + P+IS N + R E
Sbjct: 197 NRTLTLFNVTRNDTASYKCETQNPVSARR--SDSVILNVLYGPDAPTISPLNTSYRSG-E 253
Query: 164 AVSLTCDPET-PDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNP 222
++L+C + P A Y W++NG ++ + LF+ +T +G Y C+ N
Sbjct: 254 NLNLSCHAASNPPAQYSWFVNGT---------FQQSTQELFIPNITVNNSGSYTCQAHNS 304
Query: 223 -VSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLP 281
+R+ T+ + + PKP+IT NN NP E++D + TCEP+ +N TY+WW+N QSLP
Sbjct: 305 DTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLP 364
Query: 282 VSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSF 341
VSPR++ +NR L L SVTRN+ GPY+C I+++ SDPV LNVLYGPD P I PS+
Sbjct: 365 VSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNKLSVDHSDPVILNVLYGPDDPTISPSY 424
Query: 342 TYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSAT 401
TYYR G L LSC A SNPPAQYSW I+ Q Q+LFI +IT K+SGLY C NSA+
Sbjct: 425 TYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSAS 484
Query: 402 GKESSKSMTVEVSGK 416
G + T+ VS +
Sbjct: 485 GHSRTTVKTITVSAE 499
Score = 211 bits (538), Expect = 8e-55
Identities = 146/402 (36%), Positives = 203/402 (50%), Gaps = 47/402 (11%)
Query: 29 NLPTTAQVTIEAEPTKVS---------EGKDVLLLVHNLPQNLTGYIWYKGQMRDLYHYI 79
N T +T+ AEP K E +D + L T Y+W+
Sbjct: 309 NRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWW----------- 357
Query: 80 TSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFT 139
V+ + + P + + N +L + +VTR D G Y G V
Sbjct: 358 ----VNNQSLPVSPRL---QLSNDNRTLTLLSVTRNDVGPYEC----GIQNKLSVDHSDP 406
Query: 140 FTLHL--ETPKPSISSSNLNPRETMEAVSLTCDPET-PDASYLWWMNGQSLPMTHSLKLS 196
L++ P+IS S R + +SL+C + P A Y W ++G +
Sbjct: 407 VILNVLYGPDDPTISPSYTYYRPGVN-LSLSCHAASNPPAQYSWLIDGN---------IQ 456
Query: 197 ETNRTLFLLGVTKYTAGPYECEIRNPVSA-SRSDPVTLNLLPKLPKPYITINNLNPRENK 255
+ + LF+ +T+ +G Y C+ N S SR+ T+ + +LPKP I+ NN P E+K
Sbjct: 457 QHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDK 516
Query: 256 DVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDR 315
D + FTCEP+++N TY+WW+NGQSLPVSPR++ NR L L +VTRN+ Y C I++
Sbjct: 517 DAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNS 576
Query: 316 YGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLP 375
RSDPVTL+VLYGPD P I P + Y SG L LSC + SNP QYSW IN Q
Sbjct: 577 VSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH 636
Query: 376 GQKLFIRHITTKHSGLYVCSVRNSATGKESS--KSMTVEVSG 415
Q LFI IT ++G Y C V N ATG+ +S KS+TV SG
Sbjct: 637 TQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVSASG 678
Score = 195 bits (495), Expect = 8e-50
Identities = 100/215 (46%), Positives = 130/215 (60%)
Query: 199 NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVL 258
N +L + + + G Y + + + P+LPKP I+ NN P E+KD +
Sbjct: 104 NASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAV 163
Query: 259 NFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
FTCEP++++ TY+WW+N QSLPVSPR++ NR L L +VTRN+T Y+CE ++
Sbjct: 164 AFTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSA 223
Query: 319 IRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQK 378
RSD V LNVLYGPD P I P T YRSGE L LSC A SNPPAQYSW +N FQ Q+
Sbjct: 224 RRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE 283
Query: 379 LFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEV 413
LFI +IT +SG Y C NS TG + T+ V
Sbjct: 284 LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITV 318
>gi|5901930 carcinoembryonic antigen-related cell adhesion molecule
7 [Homo sapiens]
Length = 265
Score = 246 bits (628), Expect = 3e-65
Identities = 132/236 (55%), Positives = 160/236 (67%), Gaps = 3/236 (1%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG+ SA P I W+GLLLTASLL FWNLP +AQ I+ P V+EGK+VLL+VHN Q
Sbjct: 1 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVD-GEIIIYGPAYSGRETAYSNASLLIQNVTREDAGS 119
NL GY WYKG+ + I YV + + GPA++GRET Y N +LLIQNVT DAG
Sbjct: 61 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGF 120
Query: 120 YTLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYL 179
YTLH+IK + VT +F + E PKPSI+S+N NP E + V LTC PET + +YL
Sbjct: 121 YTLHVIKENLVNEEVTRQFY--VFSEPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYL 178
Query: 180 WWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNL 235
WW+N QSL ++ L LS NRTL LL TK GPYECEI+NPV ASRSDPVTLN+
Sbjct: 179 WWVNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTLNV 234
Score = 124 bits (311), Expect = 2e-28
Identities = 61/132 (46%), Positives = 82/132 (62%)
Query: 199 NRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVL 258
N TL + VT AG Y + + + + PKP IT NN NP ENKD++
Sbjct: 105 NGTLLIQNVTHNDAGFYTLHVIKENLVNEEVTRQFYVFSEPPKPSITSNNFNPVENKDIV 164
Query: 259 NFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
TC+P+++N TY+WW+N QSL VSPR+ +NR L+L S T+N+ GPY+CEI++ G
Sbjct: 165 VLTCQPETQNTTYLWWVNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVGA 224
Query: 319 IRSDPVTLNVLY 330
RSDPVTLNV Y
Sbjct: 225 SRSDPVTLNVRY 236
Score = 32.0 bits (71), Expect = 1.1
Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 37/218 (16%)
Query: 236 LPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIE---- 291
LP + I + N E K+VL Y Y W+ G+ + + R+ ++
Sbjct: 30 LPNSAQTNIDVVPFNVAEGKEVLLVVHNESQNLYGYNWY-KGERVHANYRIIGYVKNISQ 88
Query: 292 ----------------NRILILPSVTRNETGPYQCEIRDRYGGIRSDPVT--LNVLYGPD 333
N L++ +VT N+ G Y + + ++ VT V P
Sbjct: 89 ENAPGPAHNGRETIYPNGTLLIQNVTHNDAGFYTLHVIKE--NLVNEEVTRQFYVFSEPP 146
Query: 334 LPRIYP-SFTYYRSGEVLYLSCSADSNPPAQYSWTINEKFQLPGQKLFIR---------H 383
P I +F + +++ L+C ++ Y W +N + L +L +
Sbjct: 147 KPSITSNNFNPVENKDIVVLTCQPETQ-NTTYLWWVNNQSLLVSPRLLLSTDNRTLVLLS 205
Query: 384 ITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPAS 421
T G Y C ++N G S +T+ V + + AS
Sbjct: 206 ATKNDIGPYECEIQN-PVGASRSDPVTLNVRYESVQAS 242
>gi|164663826 pregnancy specific beta-1-glycoprotein 11 isoform 2
[Homo sapiens]
Length = 213
Score = 221 bits (563), Expect = 1e-57
Identities = 108/181 (59%), Positives = 134/181 (74%)
Query: 233 LNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
L L + PKP I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
Query: 293 RILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYL 352
R L L VT+ GPY+CEI + RSDPVTLN+L+GPDLPRI+PS T Y SGE L L
Sbjct: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
Query: 353 SCSADSNPPAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVE 412
SC A+SNPPAQYSWTIN KFQL GQKLFI IT KH+GLY CS RNSATG+ESS S+T+
Sbjct: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
Query: 413 V 413
V
Sbjct: 198 V 198
Score = 194 bits (492), Expect = 2e-49
Identities = 108/197 (54%), Positives = 129/197 (65%), Gaps = 16/197 (8%)
Query: 142 LHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRT 201
L +ETPKPSISSSNLNPRE ME V LTC+PETPDASYLWWMNGQSLPMTH ++LSETNRT
Sbjct: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
Query: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PKLPKPYITINNLNPRENKDVLN 259
LFL GVTKYTAGPYECEI N SASRSDPVTLNLL P LP+ + ++ + EN D+
Sbjct: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
Query: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
F P ++ Y W +NG K + + L +P +T G Y C R+ G
Sbjct: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
Query: 319 IRSD-PVTLNVLYGPDL 334
S +T+ V+ P L
Sbjct: 188 EESSTSLTIRVIAPPGL 204
Score = 66.2 bits (160), Expect = 5e-11
Identities = 62/232 (26%), Positives = 92/232 (39%), Gaps = 46/232 (19%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCT+ IKWKGLLLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
Query: 61 NLTGYIWY-KGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGS 119
Y+W+ GQ + H + + + +N +L + VT+ AG
Sbjct: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
Query: 120 YTLHIIKGDDGTRG--VTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPET-PDA 176
Y I +R VT L PS++S + E + L+C + P A
Sbjct: 93 YECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTS-----YYSGENLDLSCFANSNPPA 147
Query: 177 SYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRS 228
Y W +NG K + + LF+ +T G Y C RN + S
Sbjct: 148 QYSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEES 190
>gi|164663824 pregnancy specific beta-1-glycoprotein 11 isoform 2
[Homo sapiens]
Length = 213
Score = 221 bits (563), Expect = 1e-57
Identities = 108/181 (59%), Positives = 134/181 (74%)
Query: 233 LNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
L L + PKP I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
Query: 293 RILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYL 352
R L L VT+ GPY+CEI + RSDPVTLN+L+GPDLPRI+PS T Y SGE L L
Sbjct: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
Query: 353 SCSADSNPPAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVE 412
SC A+SNPPAQYSWTIN KFQL GQKLFI IT KH+GLY CS RNSATG+ESS S+T+
Sbjct: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
Query: 413 V 413
V
Sbjct: 198 V 198
Score = 194 bits (492), Expect = 2e-49
Identities = 108/197 (54%), Positives = 129/197 (65%), Gaps = 16/197 (8%)
Query: 142 LHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRT 201
L +ETPKPSISSSNLNPRE ME V LTC+PETPDASYLWWMNGQSLPMTH ++LSETNRT
Sbjct: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
Query: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PKLPKPYITINNLNPRENKDVLN 259
LFL GVTKYTAGPYECEI N SASRSDPVTLNLL P LP+ + ++ + EN D+
Sbjct: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
Query: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
F P ++ Y W +NG K + + L +P +T G Y C R+ G
Sbjct: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
Query: 319 IRSD-PVTLNVLYGPDL 334
S +T+ V+ P L
Sbjct: 188 EESSTSLTIRVIAPPGL 204
Score = 66.2 bits (160), Expect = 5e-11
Identities = 62/232 (26%), Positives = 92/232 (39%), Gaps = 46/232 (19%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG LSAPPCT+ IKWKGLLLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
Query: 61 NLTGYIWY-KGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGS 119
Y+W+ GQ + H + + + +N +L + VT+ AG
Sbjct: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
Query: 120 YTLHIIKGDDGTRG--VTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPET-PDA 176
Y I +R VT L PS++S + E + L+C + P A
Sbjct: 93 YECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTS-----YYSGENLDLSCFANSNPPA 147
Query: 177 SYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRS 228
Y W +NG K + + LF+ +T G Y C RN + S
Sbjct: 148 QYSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEES 190
>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
isoform 2 [Homo sapiens]
Length = 292
Score = 167 bits (424), Expect = 1e-41
Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 3/235 (1%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG SA P + I W+GLLLTASLL FWN PTTA + I + P +V+EG++V L V LP+
Sbjct: 1 MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPE 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL Y WYKG+ + I +YV+D + GPAYSGRET + L QNVT ED G Y
Sbjct: 61 NLYSYGWYKGKTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
L + + + ++ +PSI +S+ E +V LTC S+ W
Sbjct: 121 NLQVTYRNSQIEQASHH--LRVYESVAQPSIQASSTTVTE-KGSVVLTCHTNNTGTSFQW 177
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNL 235
N Q L +T +KLS N L + + + AG Y+CE+ NPVS++RSDP+ L +
Sbjct: 178 IFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLTV 232
Score = 53.9 bits (128), Expect = 3e-07
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVLNFT 261
L VT G Y ++ S L + + +P I ++ E V+ T
Sbjct: 107 LHFQNVTLEDTGYYNLQVTYRNSQIEQASHHLRVYESVAQPSIQASSTTVTEKGSVV-LT 165
Query: 262 CEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRS 321
C + ++ W N Q L V+ R+K N +L + + + + G YQCE+ + RS
Sbjct: 166 CHTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVSNPVSSNRS 225
Query: 322 DPVTLNVLY 330
DP+ L V Y
Sbjct: 226 DPLKLTVKY 234
>gi|148612793 carcinoembryonic antigen-related cell adhesion
molecule isoform 1 [Homo sapiens]
Length = 293
Score = 167 bits (424), Expect = 1e-41
Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 3/235 (1%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG SA P + I W+GLLLTASLL FWN PTTA + I + P +V+EG++V L V LP+
Sbjct: 1 MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPE 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
NL Y WYKG+ + I +YV+D + GPAYSGRET + L QNVT ED G Y
Sbjct: 61 NLYSYGWYKGKTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYY 120
Query: 121 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW 180
L + + + ++ +PSI +S+ E +V LTC S+ W
Sbjct: 121 NLQVTYRNSQIEQASHH--LRVYESVAQPSIQASSTTVTE-KGSVVLTCHTNNTGTSFQW 177
Query: 181 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNL 235
N Q L +T +KLS N L + + + AG Y+CE+ NPVS++RSDP+ L +
Sbjct: 178 IFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLTV 232
Score = 52.0 bits (123), Expect = 1e-06
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLNPRENKDVLNFT 261
L VT G Y ++ S L + + +P I ++ E V+ T
Sbjct: 107 LHFQNVTLEDTGYYNLQVTYRNSQIEQASHHLRVYESVAQPSIQASSTTVTEKGSVV-LT 165
Query: 262 CEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRS 321
C + ++ W N Q L V+ R+K N +L + + + + G YQCE+ + RS
Sbjct: 166 CHTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVSNPVSSNRS 225
Query: 322 DPVTLNV 328
DP+ L V
Sbjct: 226 DPLKLTV 232
>gi|121114300 carcinoembryonic antigen-related cell adhesion
molecule 3 precursor [Homo sapiens]
Length = 252
Score = 160 bits (406), Expect = 2e-39
Identities = 83/138 (60%), Positives = 98/138 (71%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG SA P + I W+GLLLTASLLNFWN PTTA++TIE+ P V+EGK+VLLLVHNLPQ
Sbjct: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
+L GY WYKG+ D I YV+ + G AYSGRET Y+NASLLIQNVT+ D G Y
Sbjct: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
Query: 121 TLHIIKGDDGTRGVTGRF 138
TL +IK D TG+F
Sbjct: 121 TLQVIKSDLVNEEATGQF 138
>gi|156564378 carcinoembryonic antigen-related cell adhesion
molecule 20 5L [Homo sapiens]
Length = 596
Score = 148 bits (373), Expect = 1e-35
Identities = 125/447 (27%), Positives = 201/447 (44%), Gaps = 66/447 (14%)
Query: 15 WKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQNLTGYIWYKGQMRD 74
W G+LL+ASL W+ P AQ+T+ A P ++ +DV+L V P+ + G+ R+
Sbjct: 11 WMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPRTPQIH----GRSRE 66
Query: 75 LYH---------------YITSYVV--DGEIIIYGPA-------YSGRETAYSNASLLIQ 110
L +T Y D I I+ + + + + L I
Sbjct: 67 LAKPSIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGKILTIL 126
Query: 111 NVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLET---PKP-------SISSSNLNPRE 160
V RED+G+Y + + + + + L+ P P ++S + E
Sbjct: 127 IVQREDSGTYQC------EARDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVV--E 178
Query: 161 TMEAVSLTCDPET---PDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYEC 217
ME S+T ET P +Y W++ L S T RT + V++ G Y C
Sbjct: 179 VMEGSSMTFLAETKSHPPCAYTWFLLDSIL--------SHTTRTFTIHAVSREHEGLYRC 230
Query: 218 EIRNPVS-ASRSDPVTLNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLN 276
+ N + S + + +L L P + ++LN EN ++ TC+ +++ W+L+
Sbjct: 231 LVSNSATHLSSLGTLKVRVLETLTMPQVVPSSLNLVENARSVDLTCQTVNQSVNVQWFLS 290
Query: 277 GQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPR 336
GQ L S ++ +NR LI+ + RN+TGPY CE+ + RS+P+ L + YGPD
Sbjct: 291 GQPLLPSEHLQLSADNRTLIIHGLQRNDTGPYACEVWNWGSRARSEPLELTINYGPDQVH 350
Query: 337 I-------YPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKF-QLPGQKLFIRHITTKH 388
I S L L C A+S P A+Y WT+ + G++L IR +T +H
Sbjct: 351 ITRESASEMISTIEAELNSSLTLQCWAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEH 410
Query: 389 SGLYVCSVRNSATGKESSKSMTVEVSG 415
G+Y C+ NS TG S S+ V+V G
Sbjct: 411 DGIYNCTASNSLTGLARSTSVLVKVVG 437
Score = 67.4 bits (163), Expect = 2e-11
Identities = 64/247 (25%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 101 AYSNASLLIQNVTREDAGSYTLHIIKGDD-----GTRGVTGRFTFTLHLETPKPSISSSN 155
+++ + I V+RE G Y + GT V T T+ P + S+
Sbjct: 209 SHTTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTLKVRVLETLTM------PQVVPSS 262
Query: 156 LNPRETMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPY 215
LN E +V LTC + W+++GQ L + L+LS NRTL + G+ + GPY
Sbjct: 263 LNLVENARSVDLTCQTVNQSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQRNDTGPY 322
Query: 216 ECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLN------PRENKDVLNFTCEPKSE-N 268
CE+ N S +RS+P+ L + + +IT + + E L C +S+
Sbjct: 323 ACEVWNWGSRARSEPLELTINYGPDQVHITRESASEMISTIEAELNSSLTLQCWAESKPG 382
Query: 269 YTYIWWL---NGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVT 325
Y W L G+ L LI+ ++T G Y C + G+
Sbjct: 383 AEYRWTLEHSTGEHL-----------GEQLIIRALTWEHDGIYNCTASNSLTGLARSTSV 431
Query: 326 LNVLYGP 332
L + GP
Sbjct: 432 LVKVVGP 438
>gi|156564393 carcinoembryonic antigen-related cell adhesion
molecule 20 5S [Homo sapiens]
Length = 584
Score = 148 bits (373), Expect = 1e-35
Identities = 125/447 (27%), Positives = 201/447 (44%), Gaps = 66/447 (14%)
Query: 15 WKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQNLTGYIWYKGQMRD 74
W G+LL+ASL W+ P AQ+T+ A P ++ +DV+L V P+ + G+ R+
Sbjct: 11 WMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPRTPQIH----GRSRE 66
Query: 75 LYH---------------YITSYVV--DGEIIIYGPA-------YSGRETAYSNASLLIQ 110
L +T Y D I I+ + + + + L I
Sbjct: 67 LAKPSIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGKILTIL 126
Query: 111 NVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLET---PKP-------SISSSNLNPRE 160
V RED+G+Y + + + + + L+ P P ++S + E
Sbjct: 127 IVQREDSGTYQC------EARDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVV--E 178
Query: 161 TMEAVSLTCDPET---PDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYEC 217
ME S+T ET P +Y W++ L S T RT + V++ G Y C
Sbjct: 179 VMEGSSMTFLAETKSHPPCAYTWFLLDSIL--------SHTTRTFTIHAVSREHEGLYRC 230
Query: 218 EIRNPVS-ASRSDPVTLNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLN 276
+ N + S + + +L L P + ++LN EN ++ TC+ +++ W+L+
Sbjct: 231 LVSNSATHLSSLGTLKVRVLETLTMPQVVPSSLNLVENARSVDLTCQTVNQSVNVQWFLS 290
Query: 277 GQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPR 336
GQ L S ++ +NR LI+ + RN+TGPY CE+ + RS+P+ L + YGPD
Sbjct: 291 GQPLLPSEHLQLSADNRTLIIHGLQRNDTGPYACEVWNWGSRARSEPLELTINYGPDQVH 350
Query: 337 I-------YPSFTYYRSGEVLYLSCSADSNPPAQYSWTINEKF-QLPGQKLFIRHITTKH 388
I S L L C A+S P A+Y WT+ + G++L IR +T +H
Sbjct: 351 ITRESASEMISTIEAELNSSLTLQCWAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEH 410
Query: 389 SGLYVCSVRNSATGKESSKSMTVEVSG 415
G+Y C+ NS TG S S+ V+V G
Sbjct: 411 DGIYNCTASNSLTGLARSTSVLVKVVG 437
Score = 67.4 bits (163), Expect = 2e-11
Identities = 64/247 (25%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 101 AYSNASLLIQNVTREDAGSYTLHIIKGDD-----GTRGVTGRFTFTLHLETPKPSISSSN 155
+++ + I V+RE G Y + GT V T T+ P + S+
Sbjct: 209 SHTTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTLKVRVLETLTM------PQVVPSS 262
Query: 156 LNPRETMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPY 215
LN E +V LTC + W+++GQ L + L+LS NRTL + G+ + GPY
Sbjct: 263 LNLVENARSVDLTCQTVNQSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQRNDTGPY 322
Query: 216 ECEIRNPVSASRSDPVTLNLLPKLPKPYITINNLN------PRENKDVLNFTCEPKSE-N 268
CE+ N S +RS+P+ L + + +IT + + E L C +S+
Sbjct: 323 ACEVWNWGSRARSEPLELTINYGPDQVHITRESASEMISTIEAELNSSLTLQCWAESKPG 382
Query: 269 YTYIWWL---NGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSDPVT 325
Y W L G+ L LI+ ++T G Y C + G+
Sbjct: 383 AEYRWTLEHSTGEHL-----------GEQLIIRALTWEHDGIYNCTASNSLTGLARSTSV 431
Query: 326 LNVLYGP 332
L + GP
Sbjct: 432 LVKVVGP 438
>gi|71143132 carcinoembryonic antigen-related cell adhesion molecule
4 [Homo sapiens]
Length = 244
Score = 132 bits (332), Expect = 6e-31
Identities = 69/137 (50%), Positives = 85/137 (62%)
Query: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
MG SA P W+GLL+TASLL FW+ PTT Q TIEA P+ +EGKDVLLL N+ +
Sbjct: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
Query: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
+ Y W+KG+ + I Y+ D + I G AYSGRET Y N SLL QN+T EDAGSY
Sbjct: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
Query: 121 TLHIIKGDDGTRGVTGR 137
TL I + TG+
Sbjct: 121 TLRTINASYDSDQATGQ 137
>gi|85861202 carcinoembryonic antigen-related cell adhesion molecule
16 [Homo sapiens]
Length = 484
Score = 126 bits (317), Expect = 3e-29
Identities = 94/320 (29%), Positives = 147/320 (45%), Gaps = 22/320 (6%)
Query: 2 GTLSAPPCTQRIKWKGLLLTAS---LLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNL 58
GT+S ++W + LT LL+ L A+++I EP + SEG +V L+VH L
Sbjct: 44 GTMSRAYTFFFLRWSFMALTGYSWLLLSATFLNVGAEISITLEPAQPSEGDNVTLVVHGL 103
Query: 59 PQNLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAG 118
L Y WY G + + + SY+V GPA++GRE + SL IQ + +G
Sbjct: 104 SGELLAYSWYAGPTLSVSYLVASYIVSTGDETPGPAHTGREAVRPDGSLDIQGILPRHSG 163
Query: 119 SYTLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASY 178
+Y L T G +H +P++ +++ E + + L C +P A
Sbjct: 164 TYILQTFNRQLQTE--VGYGHVQVHEILAQPTVLANSTALVERRDTLRLMCSSPSPTAEV 221
Query: 179 LWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPK 238
W+ NG +LP+ L LS R L G+ + AG Y+CE+ NPVS SRS+P+ L +
Sbjct: 222 RWFFNGGALPVALRLGLSPDGRVLARHGIRREEAGAYQCEVWNPVSVSRSEPINLTVYFG 281
Query: 239 LPKPYITINNLNPRENKDV-------LNFTCEPKS-ENYTYIWWLNGQSLPVSPRVKRPI 290
P+ + + R + L C +S Y+W NGQ+L K
Sbjct: 282 -PERVAILQDSTTRTGCTIKVDFNTSLTLWCVSRSCPEPEYVWTFNGQAL------KNGQ 334
Query: 291 ENRILILPSVTRNETGPYQC 310
++ L + S+T + G Y C
Sbjct: 335 DH--LNISSMTAAQEGTYTC 352
Score = 86.7 bits (213), Expect = 4e-17
Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 239 LPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILP 298
L +P + N+ E +D L C S W+ NG +LPV+ R+ + R+L
Sbjct: 189 LAQPTVLANSTALVERRDTLRLMCSSPSPTAEVRWFFNGGALPVALRLGLSPDGRVLARH 248
Query: 299 SVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSG--------EVL 350
+ R E G YQCE+ + RS+P+ L V +GP+ I T R+G L
Sbjct: 249 GIRREEAGAYQCEVWNPVSVSRSEPINLTVYFGPERVAILQDST-TRTGCTIKVDFNTSL 307
Query: 351 YLSCSADSNPPAQYSWTINEKFQLPGQ-KLFIRHITTKHSGLYVCSVRNSATGKESSKSM 409
L C + S P +Y WT N + GQ L I +T G Y C +N+ T S S+
Sbjct: 308 TLWCVSRSCPEPEYVWTFNGQALKNGQDHLNISSMTAAQEGTYTCIAKNTKTLLSGSASV 367
Query: 410 TVEVS 414
V++S
Sbjct: 368 VVKLS 372
Score = 63.5 bits (153), Expect = 3e-10
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 42 PTKVSEGKDVLLLVHNLPQNLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETA 101
PTK +EG+DV L V P++L Y WY+G + ++ + I GPA++GRE
Sbjct: 384 PTKPTEGQDVTLTVQGYPKDLLVYAWYRGPASEPNRLLSQ--LPSGTWIAGPAHTGREVG 441
Query: 102 YSNASLLIQNVTREDAGSYTLHII 125
+ N SLL+Q + D G YTL +
Sbjct: 442 FPNCSLLVQKLNLTDTGRYTLKTV 465
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,123,072
Number of Sequences: 37866
Number of extensions: 871843
Number of successful extensions: 4195
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 2250
Number of HSP's gapped (non-prelim): 1461
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.