Guide to the Human Genome
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Name: PSG8 Sequence: fasta or formatted (426aa) NCBI GI: 51510887
Description:

pregnancy specific beta-1-glycoprotein 8 isoform a

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [419aa] pregnancy specific beta-1-glycoprotein 8 isoform b
alt prot [297aa] pregnancy specific beta-1-glycoprotein 8 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         17           1
 C cysteine            1.6          7           1
 D aspartate           2.8         12           1
 E glutamate           4.7         20           1
 F phenylalanine       2.1          9           1
 G glycine             6.6         28           2
 H histidine           1.4          6           1
 I isoleucine          6.8         29           3
 K lysine              4.7         20           1
 L leucine            10.8         46           3
 M methionine          1.4          6           1
 N asparagine          5.6         24           2
 P proline             8.0         34           2
 Q glutamine           4.0         17           1
 R arginine            4.7         20           1
 S serine              9.4         40           3
 T threonine           8.2         35           2
 V valine              5.2         22           2
 W tryptophan          1.9          8           2
 Y tyrosine            6.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 8 isoform a [... 
PSG8                  0.975   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG1                  0.920   pregnancy specific beta-1-glycoprotein 1 
PSG3                  0.892   pregnancy specific beta-1-glycoprotein 3 
PSG7                  0.886   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG4                  0.866   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.852   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG6                  0.850   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG9                  0.840   pregnancy specific beta-1-glycoprotein 9 
PSG8                  0.632   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.502   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG2                  0.499   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.495   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG5                  0.402   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.402   pregnancy specific beta-1-glycoprotein 5 
CEACAM6               0.329   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.324   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.321   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.321   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.317   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.257   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.239   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.239   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.174   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.174   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.166   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.143   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.143   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.133   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.121   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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