Guide to the Human Genome
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Name: PSG7 Sequence: fasta or formatted (419aa) NCBI GI: 157805480
Description:

pregnancy specific beta-1-glycoprotein 7 precursor

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         15           1
 C cysteine            1.7          7           1
 D aspartate           3.3         14           1
 E glutamate           4.3         18           1
 F phenylalanine       2.1          9           1
 G glycine             6.4         27           2
 H histidine           1.7          7           1
 I isoleucine          6.0         25           2
 K lysine              4.1         17           1
 L leucine            10.0         42           3
 M methionine          0.7          3           1
 N asparagine          6.2         26           2
 P proline             8.4         35           2
 Q glutamine           4.1         17           1
 R arginine            4.8         20           2
 S serine              9.3         39           3
 T threonine           9.5         40           2
 V valine              5.5         23           1
 W tryptophan          2.1          9           2
 Y tyrosine            6.2         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 7 precursor ... 
PSG4                  0.906   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG8                  0.903   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG3                  0.893   pregnancy specific beta-1-glycoprotein 3 
PSG8                  0.890   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG1                  0.881   pregnancy specific beta-1-glycoprotein 1 
PSG6                  0.877   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.875   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG9                  0.839   pregnancy specific beta-1-glycoprotein 9 
PSG8                  0.591   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.524   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG2                  0.518   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.512   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG5                  0.413   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.413   pregnancy specific beta-1-glycoprotein 5 
CEACAM6               0.333   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.325   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.320   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.320   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.316   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.257   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.251   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.251   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.178   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.178   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.166   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.140   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.140   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.136   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.120   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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