Guide to the Human Genome
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Name: CEACAM1 Sequence: fasta or formatted (464aa) NCBI GI: 68161541
Description:

carcinoembryonic antigen-related cell adhesion molecule 1 isoform 2 precursor

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [526aa] carcinoembryonic antigen-related cell adhesion molecule 1 isoform...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         28           2
 C cysteine            1.7          8           1
 D aspartate           3.2         15           1
 E glutamate           4.1         19           2
 F phenylalanine       2.8         13           2
 G glycine             6.5         30           1
 H histidine           1.3          6           1
 I isoleucine          5.2         24           2
 K lysine              3.2         15           1
 L leucine             9.3         43           3
 M methionine          0.9          4           1
 N asparagine          8.6         40           2
 P proline             7.5         35           2
 Q glutamine           5.4         25           2
 R arginine            3.0         14           1
 S serine              9.1         42           2
 T threonine           9.7         45           2
 V valine              7.3         34           2
 W tryptophan          1.7          8           2
 Y tyrosine            3.4         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molec... 
CEACAM1               0.987   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.644   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.579   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.547   carcinoembryonic antigen-related cell adhesion molec...
PSG5                  0.372   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.372   pregnancy specific beta-1-glycoprotein 5 
PSG2                  0.367   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.364   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG11                 0.359   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM7               0.343   carcinoembryonic antigen-related cell adhesion molecu...
PSG8                  0.296   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.296   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG7                  0.294   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG9                  0.291   pregnancy specific beta-1-glycoprotein 9 
PSG1                  0.286   pregnancy specific beta-1-glycoprotein 1 
PSG4                  0.281   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG3                  0.281   pregnancy specific beta-1-glycoprotein 3 
PSG6                  0.279   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.274   pregnancy specific beta-1-glycoprotein 6 isoform b [...
CEACAM3               0.238   carcinoembryonic antigen-related cell adhesion mole...
PSG8                  0.222   pregnancy specific beta-1-glycoprotein 8 isoform c ...
CEACAM21              0.217   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.215   carcinoembryonic antigen-related cell adhesion mole...
PSG11                 0.205   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.205   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM20              0.180   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.180   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.166   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.154   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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