Guide to the Human Genome
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Name: CEACAM21 Sequence: fasta or formatted (293aa) NCBI GI: 148612793
Description:

carcinoembryonic antigen-related cell adhesion molecule isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [292aa] carcinoembryonic antigen-related cell adhesion molecule isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         18           2
 C cysteine            1.7          5           1
 D aspartate           3.8         11           2
 E glutamate           5.1         15           1
 F phenylalanine       3.1          9           1
 G glycine             6.1         18           1
 H histidine           3.1          9           2
 I isoleucine          4.4         13           1
 K lysine              2.7          8           1
 L leucine             9.9         29           3
 M methionine          0.7          2           1
 N asparagine          5.1         15           2
 P proline             6.5         19           2
 Q glutamine           5.5         16           2
 R arginine            4.1         12           1
 S serine             10.2         30           2
 T threonine           8.2         24           2
 V valine              7.8         23           2
 W tryptophan          2.0          6           1
 Y tyrosine            3.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion mole... 
CEACAM21              0.984   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.351   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.344   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.344   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.337   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.332   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM8               0.311   carcinoembryonic antigen-related cell adhesion molec...
PSG2                  0.263   pregnancy specific beta-1-glycoprotein 2 
PSG7                  0.263   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG4                  0.261   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG4                  0.261   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG11                 0.259   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG6                  0.259   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.259   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG8                  0.257   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.257   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG3                  0.254   pregnancy specific beta-1-glycoprotein 3 
PSG9                  0.254   pregnancy specific beta-1-glycoprotein 9 
PSG1                  0.247   pregnancy specific beta-1-glycoprotein 1 
CEACAM3               0.247   carcinoembryonic antigen-related cell adhesion mole...
PSG5                  0.238   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.238   pregnancy specific beta-1-glycoprotein 5 
CEACAM16              0.219   carcinoembryonic antigen-related cell adhesion molec...
CEACAM4               0.205   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.097   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.097   carcinoembryonic antigen-related cell adhesion mole...
HEPACAM               0.087   hepatocyte cell adhesion molecule 
CEACAM18              0.085   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.075   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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