Guide to the Human Genome
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Name: PSG6 Sequence: fasta or formatted (424aa) NCBI GI: 73661174
Description:

pregnancy specific beta-1-glycoprotein 6 isoform b

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [435aa] pregnancy specific beta-1-glycoprotein 6 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           1
 C cysteine            1.9          8           1
 D aspartate           2.8         12           1
 E glutamate           4.5         19           1
 F phenylalanine       1.9          8           1
 G glycine             6.8         29           2
 H histidine           2.1          9           1
 I isoleucine          6.6         28           2
 K lysine              4.5         19           2
 L leucine            10.6         45           3
 M methionine          1.4          6           1
 N asparagine          6.6         28           2
 P proline             8.3         35           2
 Q glutamine           3.5         15           1
 R arginine            4.7         20           1
 S serine              8.5         36           3
 T threonine           8.0         34           2
 V valine              5.7         24           2
 W tryptophan          1.7          7           2
 Y tyrosine            6.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 6 isoform b [... 
PSG6                  0.968   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG9                  0.875   pregnancy specific beta-1-glycoprotein 9 
PSG7                  0.868   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG3                  0.868   pregnancy specific beta-1-glycoprotein 3 
PSG4                  0.857   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG8                  0.849   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG8                  0.847   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG1                  0.841   pregnancy specific beta-1-glycoprotein 1 
PSG8                  0.557   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.493   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG4                  0.488   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG2                  0.486   pregnancy specific beta-1-glycoprotein 2 
PSG5                  0.393   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.393   pregnancy specific beta-1-glycoprotein 5 
CEACAM6               0.310   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.302   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.297   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.296   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.296   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.253   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.245   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.245   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.174   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.174   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.157   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.141   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.141   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.125   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.125   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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