Guide to the Human Genome
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Name: CEACAM5 Sequence: fasta or formatted (702aa) NCBI GI: 98986445
Description:

carcinoembryonic antigen-related cell adhesion molecule 5 preproprotein

Referenced in:

Proteins Measured in Common Diagnostic Tests
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         42           2
 C cysteine            1.9         13           1
 D aspartate           3.7         26           2
 E glutamate           3.8         27           2
 F phenylalanine       2.3         16           1
 G glycine             5.3         37           1
 H histidine           1.7         12           1
 I isoleucine          5.7         40           2
 K lysine              2.4         17           1
 L leucine             8.8         62           3
 M methionine          0.3          2           1
 N asparagine          9.4         66           3
 P proline             8.0         56           2
 Q glutamine           4.8         34           2
 R arginine            3.6         25           2
 S serine             10.7         75           2
 T threonine           8.8         62           2
 V valine              7.0         49           1
 W tryptophan          1.9         13           2
 Y tyrosine            4.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molec... 
CEACAM1               0.421   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.421   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.379   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.332   carcinoembryonic antigen-related cell adhesion molec...
PSG11                 0.230   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG5                  0.229   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.229   pregnancy specific beta-1-glycoprotein 5 
PSG2                  0.229   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.226   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
CEACAM7               0.212   carcinoembryonic antigen-related cell adhesion molecu...
PSG8                  0.191   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.191   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG7                  0.190   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG9                  0.186   pregnancy specific beta-1-glycoprotein 9 
PSG3                  0.186   pregnancy specific beta-1-glycoprotein 3 
PSG1                  0.185   pregnancy specific beta-1-glycoprotein 1 
PSG4                  0.185   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.182   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.180   pregnancy specific beta-1-glycoprotein 6 isoform b [...
CEACAM3               0.159   carcinoembryonic antigen-related cell adhesion mole...
PSG8                  0.142   pregnancy specific beta-1-glycoprotein 8 isoform c ...
CEACAM21              0.139   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.137   carcinoembryonic antigen-related cell adhesion mole...
PSG11                 0.132   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.132   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM20              0.125   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.125   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.108   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.093   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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