Guide to the Human Genome
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Name: PSG8 Sequence: fasta or formatted (419aa) NCBI GI: 194328710
Description:

pregnancy specific beta-1-glycoprotein 8 isoform b

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [297aa] pregnancy specific beta-1-glycoprotein 8 isoform c
alt prot [426aa] pregnancy specific beta-1-glycoprotein 8 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           1
 C cysteine            1.7          7           1
 D aspartate           3.1         13           1
 E glutamate           4.8         20           1
 F phenylalanine       2.1          9           1
 G glycine             6.2         26           2
 H histidine           1.4          6           1
 I isoleucine          6.2         26           3
 K lysine              4.5         19           1
 L leucine            11.0         46           3
 M methionine          1.4          6           1
 N asparagine          5.7         24           2
 P proline             8.1         34           2
 Q glutamine           4.1         17           1
 R arginine            4.5         19           1
 S serine              9.3         39           3
 T threonine           8.6         36           2
 V valine              5.0         21           2
 W tryptophan          2.1          9           2
 Y tyrosine            6.2         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 8 isoform b ... 
PSG8                  0.986   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG1                  0.912   pregnancy specific beta-1-glycoprotein 1 
PSG7                  0.909   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG3                  0.901   pregnancy specific beta-1-glycoprotein 3 
PSG4                  0.886   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.860   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.859   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG9                  0.847   pregnancy specific beta-1-glycoprotein 9 
PSG8                  0.652   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.507   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG2                  0.505   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.500   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG5                  0.406   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.406   pregnancy specific beta-1-glycoprotein 5 
CEACAM6               0.333   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.328   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.324   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.324   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.321   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.260   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.241   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.241   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.176   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.176   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.167   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.143   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.143   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.134   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.121   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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