Guide to the Human Genome
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Name: CEACAM16 Sequence: fasta or formatted (484aa) NCBI GI: 85861202
Description:

carcinoembryonic antigen-related cell adhesion molecule 16

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         35           3
 C cysteine            1.4          7           1
 D aspartate           2.7         13           1
 E glutamate           5.2         25           2
 F phenylalanine       2.5         12           3
 G glycine             8.1         39           2
 H histidine           2.1         10           1
 I isoleucine          3.5         17           1
 K lysine              2.5         12           1
 L leucine            12.0         58           3
 M methionine          1.4          7           1
 N asparagine          3.3         16           1
 P proline             6.0         29           1
 Q glutamine           3.9         19           1
 R arginine            5.6         27           2
 S serine              8.5         41           2
 T threonine           9.3         45           2
 V valine              9.5         46           3
 W tryptophan          1.9          9           1
 Y tyrosine            3.5         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molec... 
CEACAM1               0.162   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.162   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.161   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.158   carcinoembryonic antigen-related cell adhesion molec...
PSG4                  0.152   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG5                  0.150   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.150   pregnancy specific beta-1-glycoprotein 5 
PSG11                 0.149   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM8               0.147   carcinoembryonic antigen-related cell adhesion molec...
PSG2                  0.143   pregnancy specific beta-1-glycoprotein 2 
CEACAM21              0.133   carcinoembryonic antigen-related cell adhesion mole...
CEACAM21              0.132   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.126   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.126   carcinoembryonic antigen-related cell adhesion mole...
PSG9                  0.115   pregnancy specific beta-1-glycoprotein 9 
PSG3                  0.114   pregnancy specific beta-1-glycoprotein 3 
PSG4                  0.113   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.113   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.113   pregnancy specific beta-1-glycoprotein 6 isoform b [...
CEACAM7               0.110   carcinoembryonic antigen-related cell adhesion molecu...
PSG8                  0.109   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG8                  0.108   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG7                  0.108   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG1                  0.107   pregnancy specific beta-1-glycoprotein 1 
PSG11                 0.085   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.085   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM18              0.084   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.083   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.083   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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