Guide to the Human Genome
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Name: PSG4 Sequence: fasta or formatted (326aa) NCBI GI: 47419900
Description:

pregnancy specific beta-1-glycoprotein 4 isoform 2

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [419aa] pregnancy specific beta-1-glycoprotein 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         19           2
 C cysteine            1.5          5           1
 D aspartate           2.5          8           1
 E glutamate           3.7         12           1
 F phenylalanine       2.5          8           1
 G glycine             6.7         22           2
 H histidine           2.5          8           1
 I isoleucine          6.1         20           2
 K lysine              4.3         14           1
 L leucine             9.8         32           3
 M methionine          1.5          5           1
 N asparagine          4.9         16           1
 P proline             7.4         24           2
 Q glutamine           4.6         15           1
 R arginine            4.3         14           2
 S serine             10.1         33           3
 T threonine           8.6         28           2
 V valine              5.2         17           2
 W tryptophan          2.1          7           2
 Y tyrosine            5.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 4 isoform 2 [... 
PSG2                  0.850   pregnancy specific beta-1-glycoprotein 2 
PSG11                 0.824   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG4                  0.740   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG5                  0.731   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.731   pregnancy specific beta-1-glycoprotein 5 
PSG7                  0.671   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG8                  0.651   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.651   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG3                  0.651   pregnancy specific beta-1-glycoprotein 3 
PSG1                  0.646   pregnancy specific beta-1-glycoprotein 1 
PSG6                  0.645   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.645   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG9                  0.634   pregnancy specific beta-1-glycoprotein 9 
CEACAM8               0.556   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.521   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.519   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.519   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.493   carcinoembryonic antigen-related cell adhesion molec...
PSG11                 0.433   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.433   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG8                  0.417   pregnancy specific beta-1-glycoprotein 8 isoform c ...
CEACAM7               0.329   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM21              0.232   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.232   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.223   carcinoembryonic antigen-related cell adhesion molec...
CEACAM3               0.213   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.172   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.141   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.141   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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