Guide to the Human Genome
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Name: CEACAM8 Sequence: fasta or formatted (349aa) NCBI GI: 21314600
Description:

carcinoembryonic antigen-related cell adhesion molecule 8

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         24           2
 C cysteine            1.4          5           1
 D aspartate           2.9         10           1
 E glutamate           3.7         13           2
 F phenylalanine       2.0          7           1
 G glycine             5.7         20           1
 H histidine           1.4          5           1
 I isoleucine          5.2         18           2
 K lysine              2.0          7           1
 L leucine             8.6         30           3
 M methionine          1.4          5           1
 N asparagine          8.6         30           2
 P proline             8.0         28           2
 Q glutamine           4.6         16           2
 R arginine            4.6         16           2
 S serine             10.0         35           2
 T threonine           9.7         34           2
 V valine              7.2         25           1
 W tryptophan          2.0          7           2
 Y tyrosine            4.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molec... 
CEACAM6               0.760   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.733   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.733   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.682   carcinoembryonic antigen-related cell adhesion molec...
PSG4                  0.523   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG2                  0.519   pregnancy specific beta-1-glycoprotein 2 
PSG5                  0.515   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.515   pregnancy specific beta-1-glycoprotein 5 
PSG11                 0.512   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM7               0.432   carcinoembryonic antigen-related cell adhesion molecu...
PSG8                  0.401   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.401   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG1                  0.400   pregnancy specific beta-1-glycoprotein 1 
PSG7                  0.400   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG4                  0.394   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG9                  0.391   pregnancy specific beta-1-glycoprotein 9 
PSG3                  0.390   pregnancy specific beta-1-glycoprotein 3 
PSG6                  0.375   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.375   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG8                  0.318   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.283   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.283   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.263   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.260   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.257   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.202   carcinoembryonic antigen-related cell adhesion molec...
CEACAM4               0.195   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.134   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.134   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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