Guide to the Human Genome
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Name: PSG4 Sequence: fasta or formatted (419aa) NCBI GI: 42560235
Description:

pregnancy specific beta-1-glycoprotein 4 isoform 1

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [326aa] pregnancy specific beta-1-glycoprotein 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         19           2
 C cysteine            1.7          7           1
 D aspartate           2.6         11           1
 E glutamate           4.1         17           1
 F phenylalanine       2.1          9           1
 G glycine             6.2         26           2
 H histidine           1.7          7           1
 I isoleucine          6.7         28           2
 K lysine              4.8         20           1
 L leucine             9.8         41           3
 M methionine          1.2          5           1
 N asparagine          6.2         26           2
 P proline             8.1         34           2
 Q glutamine           4.1         17           1
 R arginine            5.3         22           2
 S serine              9.1         38           3
 T threonine           8.4         35           2
 V valine              5.5         23           2
 W tryptophan          2.1          9           2
 Y tyrosine            6.0         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 4 isoform 1 [... 
PSG7                  0.911   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG8                  0.886   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG3                  0.880   pregnancy specific beta-1-glycoprotein 3 
PSG8                  0.875   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG6                  0.872   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.869   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG1                  0.866   pregnancy specific beta-1-glycoprotein 1 
PSG9                  0.843   pregnancy specific beta-1-glycoprotein 9 
PSG8                  0.584   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG4                  0.569   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG2                  0.498   pregnancy specific beta-1-glycoprotein 2 
PSG11                 0.496   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG5                  0.394   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.394   pregnancy specific beta-1-glycoprotein 5 
CEACAM6               0.322   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.322   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.310   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.308   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.308   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.253   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.242   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.242   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.178   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.178   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.164   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.147   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.147   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.132   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.127   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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