Guide to the Human Genome
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Name: PSG2 Sequence: fasta or formatted (335aa) NCBI GI: 156616282
Description:

pregnancy specific beta-1-glycoprotein 2

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         15           1
 C cysteine            1.5          5           1
 D aspartate           3.0         10           1
 E glutamate           4.2         14           2
 F phenylalanine       2.7          9           1
 G glycine             7.2         24           1
 H histidine           2.4          8           1
 I isoleucine          5.7         19           3
 K lysine              3.3         11           1
 L leucine            10.7         36           3
 M methionine          1.2          4           1
 N asparagine          6.0         20           1
 P proline             7.2         24           2
 Q glutamine           4.2         14           2
 R arginine            4.2         14           1
 S serine              9.9         33           3
 T threonine          10.1         34           2
 V valine              4.8         16           2
 W tryptophan          1.8          6           2
 Y tyrosine            5.7         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 2 
PSG11                 0.895   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG4                  0.825   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG5                  0.748   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.748   pregnancy specific beta-1-glycoprotein 5 
PSG7                  0.658   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG1                  0.646   pregnancy specific beta-1-glycoprotein 1 
PSG8                  0.637   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.637   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG3                  0.636   pregnancy specific beta-1-glycoprotein 3 
PSG4                  0.628   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.622   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.622   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG9                  0.598   pregnancy specific beta-1-glycoprotein 9 
CEACAM8               0.535   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.526   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.507   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.507   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.484   carcinoembryonic antigen-related cell adhesion molec...
PSG11                 0.465   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.465   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG8                  0.372   pregnancy specific beta-1-glycoprotein 8 isoform c ...
CEACAM7               0.321   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM21              0.226   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.226   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.202   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.202   carcinoembryonic antigen-related cell adhesion molec...
CEACAM4               0.171   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.144   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.144   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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