Guide to the Human Genome
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Name: CEACAM3 Sequence: fasta or formatted (252aa) NCBI GI: 121114300
Description:

carcinoembryonic antigen-related cell adhesion molecule 3 precursor

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         25           2
 C cysteine            1.2          3           1
 D aspartate           2.4          6           1
 E glutamate           5.2         13           2
 F phenylalanine       2.4          6           1
 G glycine             7.9         20           1
 H histidine           2.8          7           1
 I isoleucine          4.8         12           1
 K lysine              3.2          8           1
 L leucine            11.9         30           3
 M methionine          1.6          4           1
 N asparagine          4.4         11           1
 P proline             7.1         18           2
 Q glutamine           5.6         14           2
 R arginine            3.2          8           1
 S serine              7.5         19           2
 T threonine           6.7         17           2
 V valine              7.5         19           1
 W tryptophan          1.2          3           1
 Y tyrosine            3.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion mole... 
CEACAM4               0.609   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.468   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.468   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.455   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.455   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.368   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.351   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM21              0.295   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.295   carcinoembryonic antigen-related cell adhesion mole...
PSG7                  0.293   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG8                  0.293   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.293   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG4                  0.287   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG4                  0.287   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG1                  0.281   pregnancy specific beta-1-glycoprotein 1 
PSG9                  0.281   pregnancy specific beta-1-glycoprotein 9 
PSG5                  0.281   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.281   pregnancy specific beta-1-glycoprotein 5 
PSG2                  0.281   pregnancy specific beta-1-glycoprotein 2 
PSG6                  0.279   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.279   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG3                  0.279   pregnancy specific beta-1-glycoprotein 3 
PSG11                 0.277   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM16              0.112   carcinoembryonic antigen-related cell adhesion molec...
CEACAM19              0.083   carcinoembryonic antigen-related cell adhesion mole...
CEACAM19              0.083   carcinoembryonic antigen-related cell adhesion molec...
CEACAM18              0.062   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.052   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.052   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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