Guide to the Human Genome
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Name: CEACAM21 Sequence: fasta or formatted (292aa) NCBI GI: 52317156
Description:

carcinoembryonic antigen-related cell adhesion molecule isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [293aa] carcinoembryonic antigen-related cell adhesion molecule isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         18           2
 C cysteine            1.7          5           1
 D aspartate           3.4         10           1
 E glutamate           5.1         15           1
 F phenylalanine       3.1          9           1
 G glycine             6.2         18           1
 H histidine           3.1          9           2
 I isoleucine          4.5         13           1
 K lysine              2.7          8           1
 L leucine             9.9         29           3
 M methionine          0.7          2           1
 N asparagine          5.1         15           2
 P proline             6.5         19           2
 Q glutamine           5.5         16           2
 R arginine            4.1         12           1
 S serine              9.9         29           2
 T threonine           8.2         24           2
 V valine              7.9         23           2
 W tryptophan          2.1          6           1
 Y tyrosine            4.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molec... 
CEACAM21              0.986   carcinoembryonic antigen-related cell adhesion mole...
CEACAM6               0.355   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.348   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.348   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.341   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.336   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM8               0.315   carcinoembryonic antigen-related cell adhesion molec...
PSG2                  0.263   pregnancy specific beta-1-glycoprotein 2 
PSG7                  0.263   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG4                  0.261   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG4                  0.261   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG11                 0.261   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG6                  0.260   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.260   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG8                  0.258   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.258   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG3                  0.254   pregnancy specific beta-1-glycoprotein 3 
PSG9                  0.254   pregnancy specific beta-1-glycoprotein 9 
PSG1                  0.247   pregnancy specific beta-1-glycoprotein 1 
CEACAM3               0.247   carcinoembryonic antigen-related cell adhesion mole...
PSG5                  0.242   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.242   pregnancy specific beta-1-glycoprotein 5 
CEACAM16              0.218   carcinoembryonic antigen-related cell adhesion molec...
CEACAM4               0.206   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.094   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.094   carcinoembryonic antigen-related cell adhesion mole...
HEPACAM               0.092   hepatocyte cell adhesion molecule 
CEACAM18              0.085   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.080   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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