Guide to the Human Genome
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Name: PSG3 Sequence: fasta or formatted (428aa) NCBI GI: 109240546
Description:

pregnancy specific beta-1-glycoprotein 3

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         18           1
 C cysteine            1.6          7           1
 D aspartate           3.0         13           1
 E glutamate           4.7         20           1
 F phenylalanine       2.3         10           1
 G glycine             6.8         29           2
 H histidine           1.9          8           1
 I isoleucine          5.4         23           3
 K lysine              4.9         21           1
 L leucine            11.2         48           3
 M methionine          1.6          7           1
 N asparagine          5.8         25           2
 P proline             8.4         36           2
 Q glutamine           3.3         14           1
 R arginine            4.2         18           1
 S serine              8.9         38           3
 T threonine           8.4         36           2
 V valine              5.1         22           2
 W tryptophan          1.9          8           2
 Y tyrosine            6.3         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 3 
PSG8                  0.879   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.879   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG7                  0.876   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG1                  0.875   pregnancy specific beta-1-glycoprotein 1 
PSG4                  0.859   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.859   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG6                  0.855   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG9                  0.841   pregnancy specific beta-1-glycoprotein 9 
PSG8                  0.576   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.501   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG2                  0.491   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.488   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG5                  0.404   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.404   pregnancy specific beta-1-glycoprotein 5 
CEACAM6               0.311   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.311   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.304   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.300   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.300   carcinoembryonic antigen-related cell adhesion molec...
PSG11                 0.256   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.256   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM7               0.247   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM21              0.169   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.169   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.155   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.144   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.144   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.125   carcinoembryonic antigen-related cell adhesion molec...
CEACAM4               0.124   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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