Guide to the Human Genome
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Name: CEACAM1 Sequence: fasta or formatted (526aa) NCBI GI: 19923195
Description:

carcinoembryonic antigen-related cell adhesion molecule 1 isoform 1 precursor

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [464aa] carcinoembryonic antigen-related cell adhesion molecule 1 isoform...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         32           2
 C cysteine            1.5          8           1
 D aspartate           3.6         19           1
 E glutamate           4.6         24           2
 F phenylalanine       2.7         14           2
 G glycine             5.5         29           1
 H histidine           1.7          9           1
 I isoleucine          4.9         26           2
 K lysine              3.6         19           2
 L leucine             8.6         45           3
 M methionine          1.0          5           1
 N asparagine          8.6         45           2
 P proline             7.6         40           2
 Q glutamine           5.7         30           2
 R arginine            3.0         16           1
 S serine              9.3         49           2
 T threonine          10.1         53           2
 V valine              7.0         37           2
 W tryptophan          1.5          8           2
 Y tyrosine            3.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molec... 
CEACAM1               0.870   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.568   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.511   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.482   carcinoembryonic antigen-related cell adhesion molec...
PSG5                  0.328   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.328   pregnancy specific beta-1-glycoprotein 5 
PSG2                  0.323   pregnancy specific beta-1-glycoprotein 2 
PSG4                  0.321   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG11                 0.316   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM7               0.302   carcinoembryonic antigen-related cell adhesion molecu...
PSG8                  0.261   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.261   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG7                  0.259   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG9                  0.256   pregnancy specific beta-1-glycoprotein 9 
PSG1                  0.252   pregnancy specific beta-1-glycoprotein 1 
PSG4                  0.248   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG3                  0.248   pregnancy specific beta-1-glycoprotein 3 
PSG6                  0.246   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.242   pregnancy specific beta-1-glycoprotein 6 isoform b [...
CEACAM3               0.209   carcinoembryonic antigen-related cell adhesion mole...
PSG8                  0.196   pregnancy specific beta-1-glycoprotein 8 isoform c ...
CEACAM21              0.191   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.189   carcinoembryonic antigen-related cell adhesion mole...
PSG11                 0.181   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.181   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM20              0.164   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.164   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.146   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.136   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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