Guide to the Human Genome
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Name: PCSK6 Sequence: fasta or formatted (652aa) NCBI GI: 20336190
Description:

paired basic amino acid cleaving system 4 isoform d preproprotein

Referenced in:

Peptide-processing Enzymes

Other entries for this name:
alt prot [956aa] paired basic amino acid cleaving system 4 isoform b preproprotein
alt prot [975aa] paired basic amino acid cleaving system 4 isoform g preproprotein
alt prot [962aa] paired basic amino acid cleaving system 4 isoform h preproprotein
alt prot [487aa] paired basic amino acid cleaving system 4 isoform c preproprotein
alt prot [623aa] paired basic amino acid cleaving system 4 isoform e preproprotein
alt prot [664aa] paired basic amino acid cleaving system 4 isoform f preproprotein
alt prot [969aa] paired basic amino acid cleaving system 4 isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         64           4
 C cysteine            1.8         12           1
 D aspartate           5.5         36           3
 E glutamate           4.8         31           2
 F phenylalanine       2.0         13           1
 G glycine             8.9         58           2
 H histidine           2.9         19           1
 I isoleucine          3.5         23           2
 K lysine              4.4         29           2
 L leucine             7.5         49           4
 M methionine          1.2          8           1
 N asparagine          4.1         27           2
 P proline             6.4         42           3
 Q glutamine           4.0         26           3
 R arginine            6.4         42           2
 S serine              7.1         46           2
 T threonine           5.5         36           2
 V valine              6.9         45           3
 W tryptophan          2.8         18           1
 Y tyrosine            4.3         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paired basic amino acid cleaving system 4 isoform d ... 
PCSK6                 0.972   paired basic amino acid cleaving system 4 isoform f ...
PCSK6                 0.951   paired basic amino acid cleaving system 4 isoform e ...
PCSK6                 0.951   paired basic amino acid cleaving system 4 isoform h ...
PCSK6                 0.951   paired basic amino acid cleaving system 4 isoform g ...
PCSK6                 0.951   paired basic amino acid cleaving system 4 isoform a p...
PCSK6                 0.951   paired basic amino acid cleaving system 4 isoform b ...
PCSK6                 0.724   paired basic amino acid cleaving system 4 isoform c ...
PCSK5                 0.607   proprotein convertase subtilisin/kexin type 5 prepro...
FURIN                 0.466   furin preproprotein 
PCSK4                 0.421   proprotein convertase subtilisin/kexin type 4 
PCSK1                 0.418   proprotein convertase subtilisin/kexin type 1 prepro...
PCSK2                 0.344   proprotein convertase subtilisin/kexin type 2 
PCSK7                 0.315   proprotein convertase subtilisin/kexin type 7 prepro...
ATXN2                 0.018   ataxin 2 
XYLT1                 0.016   xylosyltransferase I 
FOXD1                 0.015   forkhead box D1 
PRR12                 0.015   proline rich 12 
SYNPO                 0.013   synaptopodin isoform A 
GRIN2D                0.013   N-methyl-D-aspartate receptor subunit 2D precursor ...
BOD1L                 0.013   biorientation of chromosomes in cell division 1-like...
LOC100290812          0.013   PREDICTED: hypothetical protein XP_002347678 
LOC100288205          0.013   PREDICTED: hypothetical protein XP_002343496 
GRASP                 0.012   GRP1 (general receptor for phosphoinositides 1)-asso...
NOVA2                 0.012   neuro-oncological ventral antigen 2 
TAF10                 0.011   TBP-related factor 10 
MEGF8                 0.011   multiple EGF-like-domains 8 
RANBP9                0.010   RAN binding protein 9 
TAF4                  0.010   TBP-associated factor 4 
FOXK1                 0.010   forkhead box K1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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